Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01483 ATGGCGCCAAAACGAAAACCTTCTTCTCCAATCTCCATCGGTAACTGCGAGGTTACTGTCGAAGCCACTCGTTTCACCTGTAACTCCGATTCAAACGCCGTCGTAATTTCGCTTCCCCGAAGCGGAAAGATCAAAGTGTCAGTTGTTGAAAACCACGAGAACGCTTCTGAGGATTTTAGAACCAATCATAAAGAGCATGAGTTCGTGCTGGTTAATCCTAAAGATGCTGATTCTGTTAGTAAATCCTACCTTCAGGAAGTATTACAAATGTACAAGACGGAGCTACCTGGAATGAATTATGCTGCAAATACCGGAAAACAATCCAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACCCTACTGGTAAAATCCACTTGTGTTGGAAATTCAGGAAAGGTTATAGCAGCAATTACATACCAAATCATCCCTGCAGATACAGAATATGCAGAGGTCCCACTTGCAGCTGTCAGTGCAATCCATCAACGAAAGGGTTTTGGTCATTTATTGGTTCTAGAGCTACGAAAAAGACTTCAAAGTGTTGGCATTCGTTCTATTTTATGCTGGGGAGACAAAGAATCAGAAGGATTTTGGCTTAAACAGGGTTTTGTAGAAATAGCACAGGTGGGTACCAAAGGAAGGGCCCGCAGGTTACCTGTGAAAGCTGATATTCAGAAATCATTATGCTTTCTTGGTGGTTCAACTCTCATGGTTTGCCACGTAATGAAAGAATTCTTAGCCGATGATGCTAACACTACGAAGTGTCTCCCTTCACAGTTTCATCAGAATTCCTTTACACCTGCCATTGCTGAAGGATTTGATAGTCATAATCCTAAGCAATGCTGTGGTAGTATTGCTCCTTTTGCCCGAATAAATGATGATAGACAGGCCACTGGTGGAGAAAGTTTACAGGATGGAATTGATGCTAATGTGAATTATTGTTCTCAATCTACAAAAAGGGCAAAGAGGACCTGGGAAGCCTCTTTATCCTCATTGAAGTCAAAAAGAGTGAAGGGGAGCCAGCTGGTTGACAATCAATCAGGTTCTAGCTGCGGTTTTATCTTAGAGACTGATGATGAGGCCAATCCCTGTTTTGTAGAAGTCCTTCATGATCCTTCGATTACAAAAGGTTCTGGAAAATGTATCGAGAATAATTTACATTTAGAAGCTCCTATCAAGATAGAACCGCCGTCTACTAAACAGTGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGAAAACACAGCTTACACAGGTGATTGAAGACCTTGGTGGAACTATATCCACTTGTGGAAGTATGACCACCCACGTTGTCACAGGAAAAGTGAGAAAAACTCTGAATTTCTGTACTGCGCTTTGTTCAGGTGCTTGGGTGATCTCATCAAGTTGGTTAAAAGAAAGTTTTCGTGAAGGCAAATTTGTTGATGAAGTGCCTCACATACTGAACGATCCTGATTATCCGCTGAAGTACAAATCTGATTTAAAAAGTGCAGTTTTACGGGCAAAAGCTAGCTCTCACACTTTGTTCAAGGGTTATAACATATGTATTGCAGCTCATGTTCAAACTCCCGCTAAAATATTGTCTGCAATTGTCATGTCCGCAGGTGGTAATGTAATTAGTAGATTGGAGAAAGTAAACGAAACATCAACAACAATCTTTGTGACGAGCGAAGAAGACACGGAAGAAGCAATGGTAGCTGCAAAGAAAGGGATCCGGACTTTCAGTTGCGATTGGTTTATGAACTGTGTGATGAGACAAGAACTTGACTTGGATGCCCCCCAGTTTGCTGAGTCCTTATAA 1815 0.4127 MAPKRKPSSPISIGNCEVTVEATRFTCNSDSNAVVISLPRSGKIKVSVVENHENASEDFRTNHKEHEFVLVNPKDADSVSKSYLQEVLQMYKTELPGMNYAANTGKQSKFLERCVTNGKYRTLLVKSTCVGNSGKVIAAITYQIIPADTEYAEVPLAAVSAIHQRKGFGHLLVLELRKRLQSVGIRSILCWGDKESEGFWLKQGFVEIAQVGTKGRARRLPVKADIQKSLCFLGGSTLMVCHVMKEFLADDANTTKCLPSQFHQNSFTPAIAEGFDSHNPKQCCGSIAPFARINDDRQATGGESLQDGIDANVNYCSQSTKRAKRTWEASLSSLKSKRVKGSQLVDNQSGSSCGFILETDDEANPCFVEVLHDPSITKGSGKCIENNLHLEAPIKIEPPSTKQCFRIMLMNIADDAKKTQLTQVIEDLGGTISTCGSMTTHVVTGKVRKTLNFCTALCSGAWVISSSWLKESFREGKFVDEVPHILNDPDYPLKYKSDLKSAVLRAKASSHTLFKGYNICIAAHVQTPAKILSAIVMSAGGNVISRLEKVNETSTTIFVTSEEDTEEAMVAAKKGIRTFSCDWFMNCVMRQELDLDAPQFAESL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01483 604 ProSiteProfiles BRCT domain profile. 509 593 IPR001357 -
Phco2g01483 604 SUPERFAMILY BRCT domain 406 490 IPR036420 -
Phco2g01483 604 Pfam Acetyltransferase (GNAT) family 131 205 IPR000182 GO:0016747
Phco2g01483 604 Gene3D - 64 219 - -
Phco2g01483 604 CDD NAT_SF 132 191 - -
Phco2g01483 604 SUPERFAMILY BRCT domain 511 593 IPR036420 -
Phco2g01483 604 CDD BRCT_PAXIP1_rpt6_like 513 594 - -
Phco2g01483 604 ProSiteProfiles BRCT domain profile. 407 486 IPR001357 -
Phco2g01483 604 SMART BRCT_7 397 476 IPR001357 -
Phco2g01483 604 SMART BRCT_7 511 591 IPR001357 -
Phco2g01483 604 Gene3D BRCT domain 511 603 IPR036420 -
Phco2g01483 604 Gene3D BRCT domain 396 510 IPR036420 -
Phco2g01483 604 Pfam BRCA1 C Terminus (BRCT) domain 413 473 IPR001357 -
Phco2g01483 604 Pfam BRCA1 C Terminus (BRCT) domain 511 588 IPR001357 -
Phco2g01483 604 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 210 IPR016181 -
Phco2g01483 604 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 70 229 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco2g01483 BRCT 0.00012 CL0459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01483 2 44551305 44557584 Phco2g01483 2 44551305 44557584 ECH