Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01465 ATGGTCGCATTGTTCTCTCCTCCTGTCTTCTCAGCCAAGGGGTGGCTCTTAGAGGAGGAGCCATTAGGCTATAATATTACCCAAAACCGCTTCTACCAAGATGATGTGTCATCGGAGTACTCGTTTCCCTATCAATTTTATCCATCACAGCCGCAGATTGAGGTTGAATTACAAAGGTCCACTGCACCATCCCCTGATCCTGCTATGGTCAAGAAACTTAGCCACAATGCCAGTGAACGTGATCGCCGCAAGAAGGTCAACAACTTGGTTTCTTCACTTCGCTCTCTTCTTCCACTTGCAGATCAAACGAAAAAAATGAGCATTCCTTCAACAGTTTCTAGAGTGTTGAAATACATTCCCGAACTACAACAGCAAGTTCAAGCACTAACAAAGAGAAAAGAGGAGCTTCTATGCAGAATTTCTCGGCAATTGCAAGGAGATTCAGTGAAGAAAGAATCTCATAGGAAAATTTCCCATCACAACTCTTCTTTTGTTGTCTCAACAACTAGGCTTAACGATTGTGAAGCTGTAGTTCACATTTCCTCTCATGAGACCCACAAGGCTCCACTATCTGAGATCTTGCAGTGTTTAGAAAATGATGGCCTTTTTCTGCTAGATGCTTCTTCCTCACAAACCTTTGGAGGAAGATTCTTCTACAATTTGCATTTTCAGGTGGCAAAAGCAGATAGATTAGAGTCTGAGATTCTGACTGAGAAGCTTTTACCAATATATGAGAAGCAAAGGATTTTTCAATGA 756 0.4193 MVALFSPPVFSAKGWLLEEEPLGYNITQNRFYQDDVSSEYSFPYQFYPSQPQIEVELQRSTAPSPDPAMVKKLSHNASERDRRKKVNNLVSSLRSLLPLADQTKKMSIPSTVSRVLKYIPELQQQVQALTKRKEELLCRISRQLQGDSVKKESHRKISHHNSSFVVSTTRLNDCEAVVHISSHETHKAPLSEILQCLENDGLFLLDASSSQTFGGRFFYNLHFQVAKADRLESEILTEKLLPIYEKQRIFQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01465 251 MobiDBLite consensus disorder prediction 60 83 - -
Phco2g01465 251 Coils Coil 119 139 - -
Phco2g01465 251 SMART finulus 76 128 IPR011598 GO:0046983
Phco2g01465 251 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 229 - -
Phco2g01465 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 142 IPR036638 GO:0046983
Phco2g01465 251 FunFam Transcription factor ORG2 66 151 - -
Phco2g01465 251 CDD bHLH_AtORG2_like 71 144 - -
Phco2g01465 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Phco2g01465 251 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Phco2g01465 251 Gene3D - 66 156 IPR036638 GO:0046983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco2g01465 HLH 1.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01465 2 44193047 44195095 Phco2g01465 2 44193047 44195095 ECH