Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01458 ATGGGGATGGCTGCAGAGTCGCAGTTTCATGTGTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCCTACCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGCGTGAGAATGATAAGACCAACCCAAGTACACCATCTGTTTCTCTCAACAACAATCATCAGGAGGTGGAGGTGAATCTTGTTATTACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCAGATTTGAACAAGCTTAAACCCCACATGAAGAAGACCAAGTTGAAAGATCAAAAGCAAGGAACAGCAGAAAAGATTGAAAACTCAGAAGTTCGACAGCAACATGCCCAGCAAATCCTCCAAAATGACCAGCAACAAGCACCAAAACCCCAAGATCCTCAGCCAGAGTCAGAGTCACATCCACAACCAACTATAGAACAACAGCAACTATCACTACAACAAGCCAACAATAACAAGAGGAAGACCATGGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 726 0.4366 MGMAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDKTNPSTPSVSLNNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKLKDQKQGTAEKIENSEVRQQHAQQILQNDQQQAPKPQDPQPESESHPQPTIEQQQLSLQQANNNKRKTMEQGLSPETDRTRPRYSGIATVV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01458 241 MobiDBLite consensus disorder prediction 168 220 - -
Phco2g01458 241 SUPERFAMILY CheY-like 8 141 IPR011006 -
Phco2g01458 241 SMART REC_2 9 143 IPR001789 GO:0000160
Phco2g01458 241 Gene3D - 10 231 - -
Phco2g01458 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 208 IPR045279 GO:0009736
Phco2g01458 241 Coils Coil 201 221 - -
Phco2g01458 241 CDD REC_typeA_ARR 11 142 - -
Phco2g01458 241 MobiDBLite consensus disorder prediction 151 167 - -
Phco2g01458 241 MobiDBLite consensus disorder prediction 145 241 - -
Phco2g01458 241 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Phco2g01458 241 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01458 Phco-Chr2 44092172 44093701 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco2g01458 Response_reg 1.6e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01458 2 44092172 44093701 Phco2g01458 2 44092172 44093701 ECH