Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01418 ATGGGGCTGTGTCATGGAAAACCCGTTGAAACCTCACAAAGTGAAGGTGGGCACCACGTTTTCCCGGGCGAGAAAGAGGTAGTGGTGGCACCGAGTCCCAAAATCGCTACAAAAGGTTCAAAGTTTCCGTTTTACAGCCCAAGCCCGTTGCCGAGCCTGTTCAAGAACTCGCCGGCAAACTCGAGTGTGAGTTCGACACCTCTGCGGCTCTTCAAGCGGCCCTTTCCGCCTCCGTCGCCGGCGAAGCACATTCGCGCCTTACTGGCCCGCCGCCACGGCTCCGTCAAGCCCAATGAGGCCTCCATCCCCGAAGGCAGTGAGTGCGAGGTTGGGCTCGACAAGGGCTTCGGCTTCTCCAACCACTTCCACGCTCACTATGAGCTTGGTCCCGAAGTGGGCCGTGGCCACTTTGGCTACACTTGCTCTGCCAAGGGAAGAAAAGGCACCTTCAAGGGTCATGATGTTGCTGTTAAAGTCATTCCAAAGTCCAAGATGACAACAGCAATTGCTATTGAGGATGTAAGGAGAGAAGTAAAGATATTGCGAGCTTTGACTGGGCACAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGACAATGATAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGTGAACTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAAGATGCCAGAATTGTTATGATTCAAATATTAAGTGTGGTAGCTTTCTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTCTATATTTCTACGGAGGAAAATTCCACTCTGAAGGTCATTGATTTTGGACTTTCGGACTACGTGAAGCCAGATGAAAGGTTGAATGATATTGTCGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTTTGGGCAAGGACAGAATCTGGCATATTTCGGGCTGTCCTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCATCTTTATCAGCTGATGCAGTAGATTTTGTAAAGAGACTGTTGAATAAAGATTATCGGAAAAGGCTAACTGCAGCTCAGGCTCTCAGTCATCCATGGCTGACGAGTCATTGTGATGATGTGAAGATACCTCTTGATATGATAATCCACAAGCTTGTTAAAGCTTATATATGCTCATCTTCGTTACGCAAATCGGCATTAGGGGCTCTTGCAAAAACATTAACATTAGTGCAGCTAGCATATCTGAGAGAACAATTCAATATGTTAGGGCCAAACAAAAGTGGCTTAATCTCCATGCAGAACTTCAAGACGGGTATTTTAAGAAGTGTCACCGATGCCTCAAAGGATTCAAGGGTCTTAGATTATGTGAACATGGTTAGTTCAATCCAATATCGTAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTCCATCAACTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGCGTGCCTATGAGTTGTTTGAAAAGGAAGGAAATAGGCCAATTATGATTGAAGAGCTTGCCTCGGAACTTGGTCTTAGCCCTTCAGTACCAATTCATGTGGTACTCCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGCTTCTTGGGGTTTGTTAGACTCCTGCATGGGGTTTCTTCTCGCACATTTCAGAAGGCTTGA 1743 0.4555 MGLCHGKPVETSQSEGGHHVFPGEKEVVVAPSPKIATKGSKFPFYSPSPLPSLFKNSPANSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKGFGFSNHFHAHYELGPEVGRGHFGYTCSAKGRKGTFKGHDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDNDNVYIVMELCKGGELLDKILSRGGKYSEEDARIVMIQILSVVAFCHLQGVVHRDLKPENFLYISTEENSTLKVIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAVDFVKRLLNKDYRKRLTAAQALSHPWLTSHCDDVKIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTLVQLAYLREQFNMLGPNKSGLISMQNFKTGILRSVTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKEGNRPIMIEELASELGLSPSVPIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01418 580 Gene3D Phosphorylase Kinase; domain 1 119 215 - -
Phco2g01418 580 ProSiteProfiles Protein kinase domain profile. 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01418 580 FunFam CDPK-related kinase 1 119 214 - -
Phco2g01418 580 FunFam CDPK-related kinase 1 400 572 - -
Phco2g01418 580 Pfam Protein kinase domain 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01418 580 SUPERFAMILY Protein kinase-like (PK-like) 121 418 IPR011009 -
Phco2g01418 580 ProSitePatterns Protein kinases ATP-binding region signature. 132 158 IPR017441 GO:0005524
Phco2g01418 580 Gene3D - 409 498 - -
Phco2g01418 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 114 556 - -
Phco2g01418 580 MobiDBLite consensus disorder prediction 1 24 - -
Phco2g01418 580 FunFam CDPK-related kinase 3 118 290 - -
Phco2g01418 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Phco2g01418 580 CDD STKc_CAMK 125 387 - -
Phco2g01418 580 Gene3D - 414 568 - -
Phco2g01418 580 FunFam Calcium-dependent protein kinase SK5 298 393 - -
Phco2g01418 580 Gene3D Transferase(Phosphotransferase) domain 1 216 406 - -
Phco2g01418 580 SUPERFAMILY EF-hand 418 571 IPR011992 -
Phco2g01418 580 SMART serkin_6 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01418 Phco-Chr2 43443748 43448681 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco2g01418 Pkinase 5.4e-69 CL0016