Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01417 ATGGGGTGTGATCTACGGGAGGATGCGATTGCAGCGCCTGTGGACAGTGCTTTGGCTGGTGGCATTGTTGATGGGGTTAAAGGGGATGTAAATGTTGATGGTGTCGGAAATGGAGGCGGCGACGGTGCTGGAGCGGTTGTTGCTGTCGACGGTGACTCTGTTGAAGTGGTGGTGTGGGGAAGGCAGCTGTCATTTGTGGCGGTGGATGAAACACTAAGTCCTGAAGGTGTCTCCTGTGATGGTGGCTCAAGGGTGTCGAGTTGTACTACATGTGGGCTTTCTGTGGAGACAAGTGAAGGCACAAAATTAAGTAGAGTTGCAGAGAGAGAGAGAGAGAGAGAGAGGAATCTTCAATACTTGGGGTTTTCTTCCACTTGGGTATTTGTGCTCAATTTGAACTCATTGCTTCATATTTCAGAAATTATGAATAATGTTGCTGAAAGGCCACTCAAAGGAGACGTAGAGGATGATGATGAGGATGATGGTGCAGACCTTGAAGCCTGGGAGAGAACTTACGCAGAAGATAGATCATGGGAGGCTTTGCAGGAGGACGAATCTGGACTTCTTCGCCCCATTGATACTACAGCCATTTACCATGCTCAGTATCGCAGGCGCCTTCGTACCCTTGCTGCCACTGCGGCTACTGCACGAATTCAGAAGGGGCTTATACGATACCTGTACATTGTCGTTGACCTGTCTAAGGCAGCTTCAGAGAGAGACTTCCGACCAAGCAGGATGGCTGTGATTGGGAAACAGGTTGAGGTGTTTATCAGGGAATTCTTTGATCAGAATCCACTTAGTCACGTTGGTCTGGTGACTATAAAAGATGGGATTGCTAATTGCATAACAGAACTTGGTGGCAGTCCTGAGTCTCACATCAACGCTATGATGGGTAAACTGGAATGCTCAGGTGATGCCTCCTTACAAAATGCTCTAGAGATTGTTCTTGCATGTCTAAATCAAATCCCATCATATGGTCATCGAGAAGCTCTTATCTTATATTCGGCTCTCAGTACGTGTGATCCTGGCGATCTCATGGAAACCATTCAAAAATGCAAAAAGAGTAAAATAAGGTGCTCAGTCATTGGTCTTGCTGCTGAAATGTTTGTATGTAAACATCTGTGCCAGGAAACTGGAGGGACTTATTCTGTTGCGCTAGATGAGTCCCACTTTAAAGAGTTGATCCTGGAGCATGCACCACCACCTCCCGCAATAGCAGAGTATGCCACTGCTAATTTAATTAAGATGGGTTTCCCACAACGATCAGCTGAGGGTTCTGTCGCAATATGCACATGTCATGAAGAGGCTAAGGCTGGAGGGGGATACACTTGTCCAAGATGCAAAGTTCGTGTCTGTGAGCTTCCCACTGAATGTCGAATCTGTGGATTGACCCTTATTTCTTCACCCCATTTGGCAAGGTCATACCATCATCTATTTCCTATTGTGATGTTTGATGAGGTCTCTCCATCGTCTCAAAATGACTCTAGCCGCAGTTTTTCTAATACTTGTTTTGGTTGTCAACAAAGTCTTCTTAGTCAGGGAAACAAGCCTGGACTTTCTGTCATTTGCCCGAAATGCAAACAACAGTTTTGCCTTGATTGTGACATTTACATTCATGAGAGCTTACATAACTGCCCAGGCTGTGAGAGTTCCAGGCATTCTAAGTCTGTAACTGCTTCCCAATGA 1686 0.4603 MGCDLREDAIAAPVDSALAGGIVDGVKGDVNVDGVGNGGGDGAGAVVAVDGDSVEVVVWGRQLSFVAVDETLSPEGVSCDGGSRVSSCTTCGLSVETSEGTKLSRVAERERERERNLQYLGFSSTWVFVLNLNSLLHISEIMNNVAERPLKGDVEDDDEDDGADLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVIGKQVEVFIREFFDQNPLSHVGLVTIKDGIANCITELGGSPESHINAMMGKLECSGDASLQNALEIVLACLNQIPSYGHREALILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKAGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPIVMFDEVSPSSQNDSSRSFSNTCFGCQQSLLSQGNKPGLSVICPKCKQQFCLDCDIYIHESLHNCPGCESSRHSKSVTASQ 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01417 561 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 479 558 IPR013083 -
Phco2g01417 561 FunFam General transcription factor IIH subunit 2 219 404 - -
Phco2g01417 561 NCBIfam transcription factor ssl1 441 550 IPR012170 GO:0000439|GO:0006289|GO:0006351
Phco2g01417 561 ProSitePatterns Zinc finger C2H2 type domain signature. 523 543 IPR013087 -
Phco2g01417 561 Pfam TFIIH C1-like domain 502 550 IPR004595 GO:0006281|GO:0008270
Phco2g01417 561 SMART VWA_4 223 399 IPR002035 -
Phco2g01417 561 Gene3D von Willebrand factor, type A domain 219 404 IPR036465 -
Phco2g01417 561 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 158 555 - -
Phco2g01417 561 FunFam General transcription factor IIH subunit 479 556 - -
Phco2g01417 561 SMART C1_4_2 502 550 IPR004595 GO:0006281|GO:0008270
Phco2g01417 561 SUPERFAMILY vWA-like 220 387 IPR036465 -
Phco2g01417 561 CDD vWA_transcription_factor_IIH_type 221 403 IPR007198 -
Phco2g01417 561 Pfam Ssl1-like 229 419 IPR007198 -
Phco2g01417 561 SUPERFAMILY Cysteine-rich domain 476 549 IPR046349 -