Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01406 ATGAAAAGGCCTGCAAGACTCAACCCACGTGCTAATCCAGAAGGGGTAAAAGTGTTCCTGTTGGTATATGAGCAATTGCTGAAGCTATGTAGTTTGCTTGATGGCATTGGCCTAAGACTGCTTATAATGGATGTTGCATATAATGATATGCTCATCTGTTCCTACATGGCCATGACAATGCTCCAAGCTTTGGATTCAGTGGATTTGAGGCTGGACCCACTGAAGACCCTGCGACAAGATTTTGATGCCAACTGGGCACTACCCTACCTAATACCTTCCATTTGTGCTTATAAAAGGAGCACACACTGCTACCTCTCAACACATCAGCTCTTCCTTGAGTCTGATCATTACAAACTCTTGACCCTTCACAACACCTTTGCTACCAACTCAGTGACCATTTCACAACTTCATTTCTTTTCCTTCCTGAAACAAATGGCATCCAGTTCAATCTCAGCCTCAGGTTCATGGAGTGTCAAGGACAACAAGGCCTTTGAGAAGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCCCATGCTGTTGGTGGCAAAACTCCAGAGGAAGTGAAGAGACACTACGAACTCCTCGTCCAGGATGTTAAGCATATTGAGTCAGGACGAGTGCCATTCCCAAACTACAAGAAAACTGCAGGCTCTGATCAGGAGGAGAAAAGGCTGAGGAATTTGAACCTCCAGTGA 714 0.4552 MKRPARLNPRANPEGVKVFLLVYEQLLKLCSLLDGIGLRLLIMDVAYNDMLICSYMAMTMLQALDSVDLRLDPLKTLRQDFDANWALPYLIPSICAYKRSTHCYLSTHQLFLESDHYKLLTLHNTFATNSVTISQLHFFSFLKQMASSSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKHIESGRVPFPNYKKTAGSDQEEKRLRNLNLQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01406 237 MobiDBLite consensus disorder prediction 222 237 - -
Phco2g01406 237 Gene3D - 146 215 - -
Phco2g01406 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 145 228 IPR044636 GO:0003700
Phco2g01406 237 MobiDBLite consensus disorder prediction 216 237 - -
Phco2g01406 237 SMART sant 152 204 IPR001005 -
Phco2g01406 237 SUPERFAMILY Homeodomain-like 154 210 IPR009057 -
Phco2g01406 237 ProSiteProfiles SANT domain profile. 151 206 IPR017884 -
Phco2g01406 237 ProSiteProfiles Myb-like domain profile. 154 202 IPR001005 -
Phco2g01406 237 CDD SANT 162 202 IPR001005 -
Phco2g01406 237 FunFam Transcription factor SRM1 148 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01406 Phco-Chr2 43221903 43224794 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco2g01406 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01406 2 43221903 43224794 Phco6g00420 6 3947052 3947614 PCT