Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g01397 | ATGGCATCAAGAATCACCGTTAAACAACAGGGCACAGACGAAGCAGTAGTGGAGAGAGGGAAACAGCAGAAGAAGAAGGGTGTAGCTAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAATAACAAGAAACTGGTTTCTGCCAATGTGGCTAGACCTCCACCTGTTTCTAATGCAGTTGCAGTGACCAAAAGAGCGGTCCATAAACGGGGTCAGAAGAAAGTCACTGTAAAACCAAAACCTGAGAAAGTCATTGACAAGGAAGCTATCCCAGATAAGGAGATCCAGAAAGATAAGAAAAGGGAAGGAGATGACAACTCCAAGAAGGAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCTTGCGGCATAACTAACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGTTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCAATAAAGGAAAGGTCGAGAGCTATACTAGTTAATTGGCTGATAGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATTAATATAATTGATCGGTTCCTATCAGTTAAGAGCATTCCAAGTCGTAGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGGCCCCTCAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCAATAAAGGAAAGGTCGAGAGCTATACTAGTTAATTGGCTGATAGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATTAATATAATTGATCGGTTCCTATCAGTTAAGAGCATTCCAAGTCGTAGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGGCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACACCTCTTGTTTTTCTGGTTCGTTTTATCAAGGCAACAGTCCCAGAGCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGGTGCACTATGCCACCGTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGTACTCTGAATAAAACTCCCCTTTGGAATGAGACACTTAAGCTGCACACCGGTTATTCAATAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGATTCCACTCCATGGTTGGAAATGAAGAGCTGAAGGTAGTGTACAGAAAATACTCTGATCCTCAGAAAGGAGCTGTTGCTATGCTCCCACCAGCTAAAAATCTTCTGTCTGAAGGTTTTGTCCCTCAATAG | 1602 | 0.4345 | MASRITVKQQGTDEAVVERGKQQKKKGVANGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKNNKKLVSANVARPPPVSNAVAVTKRAVHKRGQKKVTVKPKPEKVIDKEAIPDKEIQKDKKREGDDNSKKETHAFTSVLTARSKAACGITNKPKEQIIDIDAGDVDNEFAAVEYIDDLYRFYKLFENENRPHDYIDSQPIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSRRELQLVGISAMLMASKYEEIWAPQNENRPHDYIDSQPIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSRRELQLVGISAMLMASKYEEIWAPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTPLVFLVRFIKATVPEQELENMAHFLSELGLVHYATVMYCPSMVAASAVFAARCTLNKTPLWNETLKLHTGYSIEQLMECARLLVRFHSMVGNEELKVVYRKYSDPQKGAVAMLPPAKNLLSEGFVPQ | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g01397 | 533 | SMART | cyclin_7 | 409 | 491 | IPR013763 | - | |
| Phco2g01397 | 533 | SMART | cyclin_7 | 313 | 396 | IPR013763 | - | |
| Phco2g01397 | 533 | SMART | cyclin_7 | 230 | 312 | IPR013763 | - | |
| Phco2g01397 | 533 | FunFam | G2/mitotic-specific cyclin-1 | 391 | 517 | - | - | |
| Phco2g01397 | 533 | SUPERFAMILY | Cyclin-like | 299 | 402 | IPR036915 | - | |
| Phco2g01397 | 533 | SMART | Cyclin_C_2 | 405 | 522 | IPR004367 | - | |
| Phco2g01397 | 533 | PANTHER | CYCLINS | 291 | 510 | IPR039361 | - | |
| Phco2g01397 | 533 | Gene3D | - | 404 | 518 | - | - | |
| Phco2g01397 | 533 | ProSitePatterns | Cyclins signature. | 308 | 339 | IPR006671 | - | |
| Phco2g01397 | 533 | MobiDBLite | consensus disorder prediction | 118 | 152 | - | - | |
| Phco2g01397 | 533 | Pfam | Cyclin, N-terminal domain | 201 | 291 | IPR006671 | - | |
| Phco2g01397 | 533 | Pfam | Cyclin, N-terminal domain | 293 | 402 | IPR006671 | - | |
| Phco2g01397 | 533 | SUPERFAMILY | Cyclin-like | 404 | 523 | IPR036915 | - | |
| Phco2g01397 | 533 | Pfam | Cyclin, C-terminal domain | 405 | 521 | IPR004367 | - | |
| Phco2g01397 | 533 | SUPERFAMILY | Cyclin-like | 186 | 292 | IPR036915 | - | |
| Phco2g01397 | 533 | Coils | Coil | 66 | 86 | - | - | |
| Phco2g01397 | 533 | CDD | CYCLIN_AtCycB-like_rpt2 | 405 | 521 | - | - | |
| Phco2g01397 | 533 | Gene3D | - | 211 | 291 | - | - | |
| Phco2g01397 | 533 | Gene3D | - | 293 | 403 | - | - | |
| Phco2g01397 | 533 | PIRSF | Cyclin_A_B_D_E | 289 | 531 | IPR046965 | GO:0016538|GO:0044772 | |
| Phco2g01397 | 533 | PIRSF | Cyclin_A_B_D_E | 1 | 292 | IPR046965 | GO:0016538|GO:0044772 | |
| Phco2g01397 | 533 | MobiDBLite | consensus disorder prediction | 105 | 154 | - | - | |
| Phco2g01397 | 533 | FunFam | G2/mitotic-specific cyclin | 210 | 295 | - | - | |
| Phco2g01397 | 533 | ProSitePatterns | Cyclins signature. | 225 | 256 | IPR006671 | - | |
| Phco2g01397 | 533 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g01397 | Phco-Chr2 | 43039773 | 43042579 | Tandem |