Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01389 ATGAGACACCGGATGAAGTATTTATTGTATTCAGTAGACGGGTTCATAGCGCGTGACTCACGCTCTCGTCTTCTAATAAGGAACGAAACCCCAAAATTTCTTAAAACCCAAACTTTCCTTCTCCGTTCGCGGAAACCCTCACCTATGACTGAGTCAATGCACGCCGTGGAACCGTCGTCGGAGGCGGCGGAGCTTCTGGCCTCCAATCCCTTGTTCGACGAGTTCTCTGCCGAGTTTGGATCCCTCCCCCTCCTGTCCATGGACTCGCTCTTCAACTCCGACGCTCTTCCCTTCCCCTCAGATCTTGAATTCGGCATGGATTACAACAATGGAGAGTTCGAAATCACCTTCGACGATCTCGACGACATCTGCATTCCCTCCGACGCCGAGGATTTCCTTCTTACTGACGCATGTAACCCCGATAACACCTCCGTTTTGGGGCCGATTGAGGAATCTTCCGCGAAGAATTCCGATTCTCTGCGTTCTGACGCATCTGTAATTTCTGGAGATCGGAGCTCCGGCGTTTCAAGGTTTTTCAATTCGCAAGCGTCGGATTCTGTTTCTGAGGGTAATTCGTGCAAAGAAGGTTTGCATGACGCGGTTGATGTTAGGGTTTCGAACATTTCCTCGCCGGAGTCTGAATTTTGCGACCGGGAGGAGTCTTCTAGTGGACCTGTTTCGTCTCAGGGTTCAGGAAATGCTGGATCGGGTGTGTATGAGGCCATAAACTCGCCCTCGCCTGATTCTGGATCTTTCGAGAGGGACATAACATCGTCTCATGCACATGCAGTTATGGACAAGGGTGTGAAATTGGAGGAAATTTCAGGGTGTGATCTGAAGAGGAAGAAAGAGAGTTGTGAAGGAAGTGCTACCAAGCACAGAAGGTTCTCTTCCTCCTCGGTGGATACTAAGACCGAGAAGCAGACTCCATCTGTTGCAATTGATGATGATGATGATGAGAAAAGGAAGGCAAGGTTGATGAGGAATAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAAGTGAGATCAATGAATTCCATCATTGCTGATCTGAGCAGCAAGATTTCATACATGGTGGCTGAGAATGCTACACTTAGACAGCAAGTGGGTGCTGGTGTGATGTGTGCTCCTCCACCACCTGCTCCTGGGATTTACCCTCATCCTCCAATGGCACCCATGCCTTATCCTTGGATGCCTTGTGCTCCCTATGTTGTCAAGCCTCAAGGATCTCAGGTTCCTTTGGTACCCATTCCTAGGTTGAAGCCTCAGCAACATACTTCAGCACCCAAAGGTAAAAAGTCTGAGACTAAGAAGAGTGAGGGGAAAACTAAGAAGGTTGCTAGTATTAGTTTCTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCTCTTGTGGATTTTAAGTTTGGCGGTTTAGTGGACAATGTTCCTGATACTGGTCTATCTAGCTATGTTAGTGATAGGGTGTATGGTCATGGTGGAGGTAAGGTTTGGTCTGTGAATGGTCCTAGGAATGGGTCTGAAAGAGATGAGGAAGTAGGGTTTTCTAATGAGAGGTTTAGTGTTAGAGGCCGGCATTTAGGAGAAGAAAGGGGTGAACGGCAGGGCCCTGATGATTTTGGTCGCCAGGGAAATGCCAGCGAACCTCTTGTTGCTTCTTTGTATGTTCCTAGGAATGATAAGATGGTGAAGATTGATGGAAACTTAATTATCCATTCCATTATGGCTAGTGAAAAAGCTATGGCATCTCAAACTGCAGAGGCACAGGAGAAGAAAGCAACAGGTTTGGCCATTCCGAAGGATTCGGATTCTGCATTGGCTATTCCTGAAGTTGGAAGACTAAGAGGTCAACATCCACATGTTTATAGGGTTCCTGCTGAACAGAGGAAGGCTCTTGGCTCTGGTTCAACCAAAGCTTTGAAGGACCATATGAAGACCTCTGCAACTGATGGTAAAATGCAGCAGTGGTTCCGTGAAGGTCTTGCAGGACCAATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTTTCTCCAAGTCCTGGAGCTATAGTTCCTGCGACATCAGTTTCGAATTTGTCAACGGAAAAGCGTCAGAATGCTACCTCGGTCAAAAAGACCAGGAATAGAAGAACCCTTCATGGGCTTCCAGATTCTCTTACTGGATCGAGTCTGAACATAACAGAAGAACATGTAAAAAACTTGCAGAAAGACCACCTCCATGGTAATGAATCTTCTATGGTGGTTTCAGTCCTTGTTGATCCCAAAGAGGCTGGTGATGGTGATGTTGATGTCGATGGCATGATGAGACCAAAGTCACTCTCTCGGATTTTCGTGGTTGTGCTAATTGATAGTGTCAAGTATGTCACTTACTCTTGCGGTCTGCCTCGTGCTTCTCCCCATTTGGTGGCTGCATATGTATGA 2469 0.4694 MRHRMKYLLYSVDGFIARDSRSRLLIRNETPKFLKTQTFLLRSRKPSPMTESMHAVEPSSEAAELLASNPLFDEFSAEFGSLPLLSMDSLFNSDALPFPSDLEFGMDYNNGEFEITFDDLDDICIPSDAEDFLLTDACNPDNTSVLGPIEESSAKNSDSLRSDASVISGDRSSGVSRFFNSQASDSVSEGNSCKEGLHDAVDVRVSNISSPESEFCDREESSSGPVSSQGSGNAGSGVYEAINSPSPDSGSFERDITSSHAHAVMDKGVKLEEISGCDLKRKKESCEGSATKHRRFSSSSVDTKTEKQTPSVAIDDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQVGAGVMCAPPPPAPGIYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQHTSAPKGKKSETKKSEGKTKKVASISFLGLFFFIMLFGGLVPLVDFKFGGLVDNVPDTGLSSYVSDRVYGHGGGKVWSVNGPRNGSERDEEVGFSNERFSVRGRHLGEERGERQGPDDFGRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTAEAQEKKATGLAIPKDSDSALAIPEVGRLRGQHPHVYRVPAEQRKALGSGSTKALKDHMKTSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPSPGAIVPATSVSNLSTEKRQNATSVKKTRNRRTLHGLPDSLTGSSLNITEEHVKNLQKDHLHGNESSMVVSVLVDPKEAGDGDVDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHLVAAYV 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01389 822 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 108 817 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 535 558 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 282 301 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 145 171 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 535 551 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 210 254 - -
Phco2g01389 822 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 319 379 IPR004827 GO:0003700|GO:0006355
Phco2g01389 822 CDD bZIP_HY5-like 322 373 - -
Phco2g01389 822 FunFam bZIP transcription factor 49 320 382 - -
Phco2g01389 822 SMART brlzneu 317 381 IPR004827 GO:0003700|GO:0006355
Phco2g01389 822 SUPERFAMILY Leucine zipper domain 321 379 IPR046347 GO:0003700|GO:0006355
Phco2g01389 822 MobiDBLite consensus disorder prediction 220 254 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 429 452 - -
Phco2g01389 822 Pfam bZIP transcription factor 321 379 IPR004827 GO:0003700|GO:0006355
Phco2g01389 822 Coils Coil 344 364 - -
Phco2g01389 822 Gene3D - 319 381 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 282 320 - -
Phco2g01389 822 MobiDBLite consensus disorder prediction 438 452 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco2g01389 bZIP_1 9.5e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01389 2 42992474 42999048 Phco2g01389 2 42992474 42999048 ECH