Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01384 ATGATGGAGGTGTCGGTGGGTGGCAGCAGCGTCTCTGAGCTGAGTCCGGACGAGGAGAGGATCATGATCAAAGACATTGCTCTCGCCGCCCAAGCCAACAGCAAAGAAGGAGACACCTTCTTCTTGATCACCCAGAGATGGTGGCAATATTGGATTGAATATGTGAACCAAGACCAGTCAAACACTTCATATGATGGATCTTCATTTTCAGAACATGATTTGGCCAATTCAAGTGCGTTAAAGAGGCCAGCTGGTATTGATAATTCTGATTTGATAGATGATGCTGTGTCAGAGGACTCTGGTATGGGTATTGAGATTCATGATACTCTTCTAGAAGGTCGTGACTATGTGTTACTTCCCCAAGAAGTTTGGGATCAATTATTTAGATGGTATGGTGGTGGACCTACATTGGCAAGGAAAGTTATTAGTTCAGGTTTTTCCCAGACTGAATTGGCAGTAGAGGTGTATCCTTTGCGGCTTCAATTACTTATGTTGCCAAAAAATGACCGTTTTTCTATAAGAATAAGCAAGAAGGAAACCATTGGACAGCTTCATAGAAAAGCTTGTGAAATATTTGATCTTCAGCCAGACCAAGTGTGTATTTGGGATTACTATTCCCGTCGGAAGCATGCTTTGATGAATGACATGGACAGAACTCTTGATGATGCTAATTTACAAATGGACCAAGATATTCTTGTTGAGGTCATCAACAATTCAAACAACACAAGTTTTGCTCAAGAAAACGGTTCTGCATTGAGGGAAGCGAATTTTGCTCTTGTGGAGCCCCCAAAGTCGAGCTTATCAATTGCTGGTGGCTTATCTGCTAGCAAAGGTGCATCTAGAGGCTACAACACAGAACTTTCTTCATCTCTGAACCTAAATTCTCCGGTTAGAGACATGGAAAACCCTCATGGAACTAGTGGTGTCACCACAAGAGGTTCATTTGGTGGTCTAACTGGGTTGCTGAATCTTGGAAATACTTGTTACATGAATAGTGCGATACAATGCCTTGTTCATACTCCGGAATTTGCTAGATACTTCAGGGAAGACTACCATCGAGAGATAAATTGGCAAAATCCATTGGGCATGGTTGGTGAACTAGCCCTAGCATTTGGTGAGTTGCTTCGAAAGCTATGGGCACCTGGACGAACCCCAATTGCTCCTCGGCCCTTTAAAACTAAGCTTGTTCGCTTTGCACCTCAGTTCAGTGGACACAATCAACATGATTCTCAGGAGCTTTTAGCATTTCTTCTGGATGGTCTTCATGAAGACTTGAATCGAGTAAAGCACAAACCATATATAAAGTCTCGAGATGCTGATGGCAGACCTGATGAAGAAGTGGCTGATGAATATTGGGCAAATCATATTTCTCGTAATGACTCCATAATTGTTGATGTATGCCAGGGACAATACAAGTCAACTTTGGTTTGTCCAGTTTGCAATAAAGTCTCTGTCACATTTGATCCATTTATGTACCTTTCCCTGCCACTCCAATCCTCCACTGCCAGTAGAACCATGACAGTGACAGTCTTTTATTGTGATGGGTCTGCCCTTCCATCTCCTTGTACAGTAACTGTCCCTAAGCAGGGCCGAATCAAAGATCTCGTCCAGGCACTTAGCAATGCCTGCTCATTGAAGCACAATGAGAGGCTATTGCTTGTGGAGATACGAAACCATTTGATCCATAGATATTTGGAAGATCCTGTTCATTTGTCTACTATTAAAGATGACGAGCGTCTTGCTGCTTATAAGATTCCAAAGATAGACAAGAACACAAAGTATCTCCAGTTGATACATCGCCGAAGAGAACAGAGTAGTGACTCTCACGTCATATCAGGATGGAAACCATACGGAACACCTATTGTTTCTTTGATTTCATGTGATGATACAGTCACAAGAGGTGATATACAAGTAATAGTTAATCGTATTCTTTCCCCTCTGCTAAGGAGAGGTGGTAATGTAGAACAAGCTACTACTTCTGAAGCAAGCATCCCAAAAGCAGCACCTGAAGAATGCAGTCTTACTAATGATGATGCATGTGCTGGAAACATGGTGTCAAATTCATTAAATAAGGAATTTACCAATTCAAAGGCACCATCAATGCCAACGTTACCTCTTCTCTTGGTAGGTGATAACAATGCTTGCATTGATCTTTCAATGGGCGAGGAGAAAGTGGTTAAACTGCCTCAAGCATCCCCAAAAGTTTTAGTGTATATTGATTGGTCTCAGAAGCTTCTGGAGAAGTATGATACTCATCCAATTGAGAGTTTGCCTGAAGTTTTAAAATATGGGCCTGTAACCAAGAAAGCTCGGACTGAACCTCTCTCCTTGTACACCTGCTTGGAAGCTTTTCTGCGCGAAGAACCTCTGGTGCCTGAAGATATGTGGTACTGTCCTAAATGCAAAGAGAGACGACAAGCTAGCAAGAAGCTTGATTTGTGGAGGCTACCAGAGGTTTTGGTCATTCATTTGAAGAGGTTTTCCTACAGCAGGTCAATGAAGCATAAACTGGAGACCTTTGTTAACTTTCCCGTCCATGATTTTGATTTAACTAATTACATAGCCAACAAAAACAACTCTCGCCGGCAACTGTACGAACTGTATGCCCTTACAAATCATTATGGTAGTATGGGTAGCGGGCATTACACTGCACATATTAAGCTTTTAGATGAGAACAGGTGGTACAATTTTGATGACAGCCACATAACACTGATAAGTGAGGATGAGGTTAACACTGCTGCTGCCTATGTTCTATTTTACCGGAGGGTGAAGACGGAGGAGGCAGCCATTAGCAATGGAGCTTAG 2805 0.4235 MMEVSVGGSSVSELSPDEERIMIKDIALAAQANSKEGDTFFLITQRWWQYWIEYVNQDQSNTSYDGSSFSEHDLANSSALKRPAGIDNSDLIDDAVSEDSGMGIEIHDTLLEGRDYVLLPQEVWDQLFRWYGGGPTLARKVISSGFSQTELAVEVYPLRLQLLMLPKNDRFSIRISKKETIGQLHRKACEIFDLQPDQVCIWDYYSRRKHALMNDMDRTLDDANLQMDQDILVEVINNSNNTSFAQENGSALREANFALVEPPKSSLSIAGGLSASKGASRGYNTELSSSLNLNSPVRDMENPHGTSGVTTRGSFGGLTGLLNLGNTCYMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKTKLVRFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHISRNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSSTASRTMTVTVFYCDGSALPSPCTVTVPKQGRIKDLVQALSNACSLKHNERLLLVEIRNHLIHRYLEDPVHLSTIKDDERLAAYKIPKIDKNTKYLQLIHRRREQSSDSHVISGWKPYGTPIVSLISCDDTVTRGDIQVIVNRILSPLLRRGGNVEQATTSEASIPKAAPEECSLTNDDACAGNMVSNSLNKEFTNSKAPSMPTLPLLLVGDNNACIDLSMGEEKVVKLPQASPKVLVYIDWSQKLLEKYDTHPIESLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPVHDFDLTNYIANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHITLISEDEVNTAAAYVLFYRRVKTEEAAISNGA 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01384 934 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 250 922 - -
Phco2g01384 934 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 865 882 IPR018200 GO:0004843|GO:0006511
Phco2g01384 934 Pfam DUSP domain 37 142 IPR006615 GO:0004843
Phco2g01384 934 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 320 335 IPR018200 GO:0004843|GO:0006511
Phco2g01384 934 CDD Peptidase_C19R 768 921 - -
Phco2g01384 934 SMART dusp 33 145 IPR006615 GO:0004843
Phco2g01384 934 Gene3D - 156 243 - -
Phco2g01384 934 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 319 923 IPR028889 -
Phco2g01384 934 Gene3D Cysteine proteinases 743 931 - -
Phco2g01384 934 SUPERFAMILY Cysteine proteinases 317 923 IPR038765 -
Phco2g01384 934 ProSiteProfiles DUSP domain profile. 14 142 IPR006615 GO:0004843
Phco2g01384 934 Pfam Ubiquitin carboxyl-terminal hydrolase 319 920 IPR001394 GO:0004843|GO:0016579
Phco2g01384 934 Gene3D Cysteine proteinases 309 549 - -
Phco2g01384 934 Pfam Ubiquitin-specific protease C-terminal 492 626 IPR029346 -
Phco2g01384 934 SUPERFAMILY DUSP-like 15 142 IPR035927 -
Phco2g01384 934 Gene3D - 5 155 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01384 Phco-Chr2 42864575 42882946 Transposed