Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01361 ATGGGGTTTTGTTCTCTCAAGCCTTGGTTTGGTGTTATGCTCTTTTCCCTCCTGATTCATTTTCTTACGTTTCAATATTGCTGTGCTGATGCGAACTCAACACTGGTTGTAAATGCTTCCTTCGATAAGGTGAATGCAAGGCGAATTCCTAACAGTTTTCTTGGAGTGTTCTTTGAGGAGATAAATCATGCTGGTGCTGGGGGACTGTGGGCAGAACTTGTAAGCAATAGAGGCTTTGAAGCTGGAGGACCAGACAACACCTTAAATATTTATCCTTGGTCAGTTATTGGAAATGAGTCATCCATTTCTGTATCAATAAACCATACCTCTTGCTTTGCGCGTAATAAAGCTGCATTACTAATGAAAGTGTATTGTGGTGGTCACGAACCTTGCCCATATGGTGGCGTTGGTATCTCTAATCCTGGTTATTGGGGCATGAATTTTGAGCAAGGAAAGAGGTACAAGGTGGTCTACCATGTTAAATCAGAAACAAAGTTTGATTTTCAAATTTCATTCAAGGGTGTTGATGTTATAAAAGTGGCATCAAATACCAGGCATGTTTTTGGAGATAGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAGATACTAATCACTATTCAAGTCTTCAAATAACCACAACCAGTGAAGGGAGATTCTTGCTAGACCAGGTGTCAGCTATGCCATTGGACACTCATATGGGCCATGGCTTCAGAAAGGACCTTTTTCAAATGGTGGCAGATTTGAAACCTAAATTTCTCAGATTTCCTGGTGGTACTTATGTTGAAGGTGATCATCTGCAAAACAGATATCAGTGGAAAGATACAATTGGACCATGGGAAGAGAGACCTGGACATTTCAATGATATTTGGAACTATTGGAGTGAAGATGGAATTGGTTATTTTGAATATCTCCAACTAGCAGAGGACCTTGGTGCATTGCCCATATGGGTTTTTAACGCTGGTATCAGCGTTCATGAAGAAATTAATGCAACAGCTATAGCTCCTTATGTGCAAGATGCCCTGGATGGCATTGAATTTGCAAGAGGCTCTCCTAAATCAAAATGGGGTTCTGTTAGAGCTGCAATGGGACATCCTAAACCATTTGACTTGAGATATGTTGCTGTTGGAAATGAAGATTGTTGGCATTTTAATTATCAAGGAAATTACCTTAAGTTTTATGACGCTATAAGATCTGCCACCCCAGATATTCAAATTATCTCAAATTGTGATGCTTCTAGTGCACCATTAAAGCATCCAGCTGACTTATATGATTTTCATATTTATACAGACTCCAATGACATGTTTTCTAAGTCCACTTGGTTCGGTAACACTTCACGAGCTGGTCCAAAGGCTTTTGTGAGTGAGTACGCTGTGTGGAAAGAGGATGCTGCAAATGGAAGTCTTTTGGCTGCTATAGCTGAAGCCGCATTTCTTATTGGACTAGAGAAGAACAGTGATATTGTTCAGATGGTTTCTTATGCGCCACTTTTCTCGAACATAAATGACAGGAGATGGATTCCCGATGCAATTGTGTTCGACTCTTATCAGCTCTATGGAACACCCAGCTATTGGGTGCAGAAACTTTTCATTGAGTCCACTGGAGCGACATTTCTTGACTCAACACTCCTTACAACTTCATCTAATAAACTTATTGCTTCTGCAATTATCTGGGAAAATTCTACAGAGAAGAAAAGTTACCTAAGAGTAAAGGTAGTAAACTTTGGAATAGCCACAGAGAGCCTTAACATTTATATAATTGGGTTGAACTCAAATGTGCAACAATTTGGTTCTACAAAGACAGTTCTTACATCAACCAACTTAATGGATGAGAATTCCTTCTTGGAGCCCAAGAAGGTGGTGCCACAAACAAGTTCCCTAGAGAATGCTGGCAAGTACATGAATGTTATACTCTCTTCCTATTCAGTGACATCATTAGATTTTTTTCTTTGGACATACCTTGTTATAGGGGCATGTTTTGCTTATGCTAACCAGACTTCAACTCTGGTTGTAGATGTTTCTGATTCTGGAAGGCCAATTCCTGACACTCTTTTCGGAATATTTTTTGAGGAGATCAATCATGCTGGTACTGGTGGATTGTGGGAAGAACTTGTGAACAACAGAGGTTTTGAAGCTGGGGGCACACGAGTTCCATCAAATATTGCACCCTGGACTATAGTTGGGAAAGAACCAGCCATTTTCATACAAACTGAACTTAGCTCTTGCTTTGAACACAACAAGGTTGCATTGAAACTAGATGTGCAGTGTGACAATTGCCCTTCTGATGGTGTTGGTGTCTCTAATCCTGGTTTTTGGGGCATGAATATTGTGGAAGGGAAGACATACAAAGTTGTCTTCTTTGTTAAATCAAAAGGAGCACTAGATATGACAGTATCATTCAGAGAAACTGAAGGTGGAAGGATATTGGCTTCTTGCAATATCATTGCTTCTGCATCAGAAGTTTCAAATTGGGAAAGGATGGAGACTATATTAGAAGCCGATGCATCAAGTTCCGACTCAAGTTTGTATTTAACAACAACCAAAAAAGGGGTTATATGGTTGGACCAAGTGTCTGCCATGCCTGTGGACACATATAAGGGACATGGTTTCCGAAGTGACTTGGTTAACATGCTAATAGACTTGAAACCAGCCTTTTTAAGATTTCCAGGTGGCTGTTTTATTGAAGGGGAAAGATTAAGAAATGCATTTCGGTGGAAAAATAGTGTTGGACCCTGGGAACAGAGACCTGGCCATTTTGGTGATGTTTGGAGTTATTGGACAGACGATGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCATTGTGGGTGTTCAACAGTGGCATAAGCCATACTGAAGAAATTGATACAAAGGACATCACACCTTTTGTGCAGGAAAGCCTTGATGGTATTGAGTTTGCAAGAGGTGCAGCTACTTCAAAATGGGGTTCCCTTAGAGCATCTATGGGGCACCCAGACCCATTTGACCTAAAATATGTTGCTGTTGGAAATGAAGATTGCCAGAAGAAAAACTACCAAGGAAACTACCTAGCTTTCTACAGGGCAATAAAAGCGGCTTATCCAGACATTCAAATAGTTTCAAACTGTGATGCTTCGTCCAAACCATTAAATCACCCAGCAGATATGTATGATTATCACACTTATCCTAAGGAATATGAAACTATGTTTAATAACGCTGATGTGTTTGATAAAACACCACGAAATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGAACAAGCTAAGCAGGGAACCCTTTTGGGAGCTGTATCAGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGTGATCATGTGATAATGGCTAGCTATGCACCACTTTTCGTAAATGCAAATGACAGGAAGTGGAACCCAGATGCAATTGTTTTTAGTTCCAATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGTTTATGTTTAGAGAGTCAAATGGAGCAACACTTCTCAAATCACAACTTCAAACACCTCACCCTAATTCAGTTGCTGCATCTGCAATTATCTGCAAAAATTCCCAAACTTACTTGAAAATAAAGGTTGCAAACGTGGGGAACAGCCCAATAAATCTCCAGATTTCTCTGCAAGGAATTGAGAGTTCAGATGCAACTAAGGCAACAAAGACAGTGCTCACATCTGCAGATGCATTCGATGGGAACAGCTTTGCAAACCCAACAAAGATAGTACCAAAACGAAATCCACTTCTGAGTGGTGGCAAAGAGATAAATGACATACTTCCTCCAGTTTCATTTACAGTATTTGATTTATTGATTAGAAGACCATAA 3852 0.4016 MGFCSLKPWFGVMLFSLLIHFLTFQYCCADANSTLVVNASFDKVNARRIPNSFLGVFFEEINHAGAGGLWAELVSNRGFEAGGPDNTLNIYPWSVIGNESSISVSINHTSCFARNKAALLMKVYCGGHEPCPYGGVGISNPGYWGMNFEQGKRYKVVYHVKSETKFDFQISFKGVDVIKVASNTRHVFGDRKWKRVETIVEAKDTNHYSSLQITTTSEGRFLLDQVSAMPLDTHMGHGFRKDLFQMVADLKPKFLRFPGGTYVEGDHLQNRYQWKDTIGPWEERPGHFNDIWNYWSEDGIGYFEYLQLAEDLGALPIWVFNAGISVHEEINATAIAPYVQDALDGIEFARGSPKSKWGSVRAAMGHPKPFDLRYVAVGNEDCWHFNYQGNYLKFYDAIRSATPDIQIISNCDASSAPLKHPADLYDFHIYTDSNDMFSKSTWFGNTSRAGPKAFVSEYAVWKEDAANGSLLAAIAEAAFLIGLEKNSDIVQMVSYAPLFSNINDRRWIPDAIVFDSYQLYGTPSYWVQKLFIESTGATFLDSTLLTTSSNKLIASAIIWENSTEKKSYLRVKVVNFGIATESLNIYIIGLNSNVQQFGSTKTVLTSTNLMDENSFLEPKKVVPQTSSLENAGKYMNVILSSYSVTSLDFFLWTYLVIGACFAYANQTSTLVVDVSDSGRPIPDTLFGIFFEEINHAGTGGLWEELVNNRGFEAGGTRVPSNIAPWTIVGKEPAIFIQTELSSCFEHNKVALKLDVQCDNCPSDGVGVSNPGFWGMNIVEGKTYKVVFFVKSKGALDMTVSFRETEGGRILASCNIIASASEVSNWERMETILEADASSSDSSLYLTTTKKGVIWLDQVSAMPVDTYKGHGFRSDLVNMLIDLKPAFLRFPGGCFIEGERLRNAFRWKNSVGPWEQRPGHFGDVWSYWTDDGFGYFEGLQLAEDIGARPLWVFNSGISHTEEIDTKDITPFVQESLDGIEFARGAATSKWGSLRASMGHPDPFDLKYVAVGNEDCQKKNYQGNYLAFYRAIKAAYPDIQIVSNCDASSKPLNHPADMYDYHTYPKEYETMFNNADVFDKTPRNGPKAFVSEYALIGEQAKQGTLLGAVSEAGFLIGLERNSDHVIMASYAPLFVNANDRKWNPDAIVFSSNQVYGTPSYWVQFMFRESNGATLLKSQLQTPHPNSVAASAIICKNSQTYLKIKVANVGNSPINLQISLQGIESSDATKATKTVLTSADAFDGNSFANPTKIVPKRNPLLSGGKEINDILPPVSFTVFDLLIRRP 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01361 1283 Gene3D Glycosidases 857 1164 - -
Phco2g01361 1283 FunFam Alpha-L-arabinofuranosidase 1 858 1165 - -
Phco2g01361 1283 SUPERFAMILY (Trans)glycosidases 211 539 IPR017853 -
Phco2g01361 1283 SUPERFAMILY (Trans)glycosidases 840 1172 IPR017853 -
Phco2g01361 1283 Gene3D - 534 649 IPR013780 -
Phco2g01361 1283 Gene3D - 1165 1278 IPR013780 -
Phco2g01361 1283 SMART alpha_l_af_c 456 643 IPR010720 GO:0046373|GO:0046556
Phco2g01361 1283 SMART alpha_l_af_c 1089 1272 IPR010720 GO:0046373|GO:0046556
Phco2g01361 1283 Pfam Alpha-L-arabinofuranosidase C-terminal domain 1090 1272 IPR010720 GO:0046373|GO:0046556
Phco2g01361 1283 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 660 1280 - -
Phco2g01361 1283 Gene3D - 70 225 - -
Phco2g01361 1283 Gene3D - 702 856 - -
Phco2g01361 1283 FunFam Alpha-L-arabinofuranosidase 1 226 532 - -
Phco2g01361 1283 SUPERFAMILY Glycosyl hydrolase domain 1155 1277 - -
Phco2g01361 1283 Gene3D Glycosidases 226 533 - -
Phco2g01361 1283 FunFam Alpha-L-arabinofuranosidase 1 532 650 - -
Phco2g01361 1283 Pfam Alpha-L-arabinofuranosidase C-terminal domain 457 643 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01361 Phco-Chr2 42509062 42520278 Dispersed/Tandem