Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01346 ATGGGGAAGAAGCGAAAGGCAGCACCCAAATCTTCTCAATCCGCTGAGCCTCCGCTCAAGCATCACCAACCTGAACCCCAAATTGCGCCACCCGAGTACGAGGAAGTCGAAGAGGAAGAAGAGGAGGAAGAAGAAATAGAAGAGGAAGTAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGACGATGAAGAGCAACAACAACAAGACGACGACGACGACCCGATCGAGAAGCTTTTGGAACCTTTAAGCAAGGAACAGATCGTGAACCTTCTTAGCGAGGCGGCGGCAAATCACCGCGACGTGGCGGACCGGATCCGCAAGGCCGCTAACGAGGATCCCGTGCACAGGAAGATCTTTGTGCACGGGTTGGGATGGGACACCACAGCGGGAACCCTAATCAGTGCTTTCCGGCAGTACGGAGAGATCGAGGACTGCAAGGCCGTAACCGATAAGGTCTCCGGCAAGTCCAAGGGCTACGGCTTCATCCTCTTCAAGACGCGGCGCGGCGCGCGCAACGCTCTCAAGCAGCCGCAGAAGAAGATCGGCAACCGTATGACGGCGTGCCAGCTGGCGTCCATCGGCCCTGTCAGTGGCAGCCAGAGCCAGCCGCAGGCATTGCCTTCCTCGGCGCCGGTGCTGTCATCGTCGGGTTCGGAGTACACGCAGAGGAAGATCTACGTGAGCAACGTCGGTGCGGAACTCGATCCGCAGAAGCTTCTGGCGTTCTTTTCACGGTTCGGGGAAATTGAGGAGGGACCTTTGGGGCTGGATAAGCTAACCGGAAAACCGAAAGGGTTTTGTTTGTTTGTTTACAGGAGTGCGGAGAGTGCGAGGAGGGCCTTGGAGGAGCCTCATAAGGACTTTGAGGGACATATTTTGCACTGCCAGAAGGCGATTGACGGGCCCAAGCCTGGGAAGTTGCAGCAGCAGCAACACGGGAATGTAAATGCCCAGGCCCAGCGGACCCAGTTTCAGAGGAATGATACTACCAATGCAGGTGGCGTTGACGGCCCTCCTGGCGTCGCAGGGGACGTTGGGGCTGACGAATTTGTTGGGGAGTATTGGAACGAGTGCTGCGGTGAATCCTGGTGTGCCTGCTTCGGGGGCTGGAGTACAGAGTGGTTACAGTGCTCAGTCAAATATTAG 1155 0.5654 MGKKRKAAPKSSQSAEPPLKHHQPEPQIAPPEYEEVEEEEEEEEEIEEEVEEEEEEEEEEEEEDDEEQQQQDDDDDPIEKLLEPLSKEQIVNLLSEAAANHRDVADRIRKAANEDPVHRKIFVHGLGWDTTAGTLISAFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGARNALKQPQKKIGNRMTACQLASIGPVSGSQSQPQALPSSAPVLSSSGSEYTQRKIYVSNVGAELDPQKLLAFFSRFGEIEEGPLGLDKLTGKPKGFCLFVYRSAESARRALEEPHKDFEGHILHCQKAIDGPKPGKLQQQQHGNVNAQAQRTQFQRNDTTNAGGVDGPPGVAGDVGADEFVGEYWNECCGESWCACFGGWSTEWLQCSVKY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01346 384 Coils Coil 33 73 - -
Phco2g01346 384 FunFam UBP1-associated protein 2A 212 343 - -
Phco2g01346 384 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 119 196 IPR000504 GO:0003723
Phco2g01346 384 SUPERFAMILY RNA-binding domain, RBD 118 199 IPR035979 GO:0003676
Phco2g01346 384 Gene3D - 30 199 IPR012677 -
Phco2g01346 384 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 28 303 - -
Phco2g01346 384 SUPERFAMILY RNA-binding domain, RBD 210 322 IPR035979 GO:0003676
Phco2g01346 384 FunFam UBP1-associated protein 2A 112 196 - -
Phco2g01346 384 Gene3D - 200 339 IPR012677 -
Phco2g01346 384 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 226 315 IPR000504 GO:0003723
Phco2g01346 384 MobiDBLite consensus disorder prediction 31 77 - -
Phco2g01346 384 SMART rrm1_1 120 192 IPR000504 GO:0003723
Phco2g01346 384 SMART rrm1_1 227 299 IPR000504 GO:0003723
Phco2g01346 384 MobiDBLite consensus disorder prediction 1 77 - -
Phco2g01346 384 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 121 187 IPR000504 GO:0003723
Phco2g01346 384 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 228 295 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01346 Phco-Chr2 42300742 42302003 Transposed