Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01331 ATGGGATCTCAAGGTGGGGCAGTCCAGGAGCCAAAGAGTGGGTCTTTGGCTAGGGAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCACAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTGGATGAGCTGCTCAAGGGTGTGTGGAATGCTGAATCTGGAACTGATGCATACATGCAGCAAGGTCAGGTAGCTTCTGCTGGATCATCTTTGAATCCTCAAGGGAGTCTAACATTGAGTGGGGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGGGTGTTAGTCAGGAAAGAGAAAGACAGCCTACAGTGGGTGAGATGACCCTGGAGGATTTTTTGGTGAAGGCTGGTGTGACTACTGAGCCTTTCTCTAATGAGGATAGTGCCATGGCCATGCCAGGGGTTGATTCCCAACACAACACATCACAACATGCTCATTGGCTGCAATACCAGCTCCCTTCAGTGCAGCAACAGCCACAACAACAACAACATCAACATCAAAATCAGCAGAATAGTATGATGCCGGGTTTTTCAGGTTTTATGGCTGTTCAACAGCCTATGCCGATTGTGGTGAATCCGGTTCTGGATGCAGGATACTCTGAAGCAATGCCGTCTTCTTTGATGGGTGCCTTATCGGATTCACAAACTGCAGGTAGGAAAAGGGCTGCCTCAGGTAATGTGGTTGAGAAAACTGTTGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCCGCAGCTCGGTCCCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATTAAAGTTTCGCTTTTAGAAGAAGAGAACGAAAGACTTAAAAGACAGAATGAGATAGAGAAGGTATTGCCAAGTGCACCGCCACCTGACCCTAAACATCAGCTTCGCAGAACTAGTTCAGCACCCCTTTGA 951 0.47 MGSQGGAVQEPKSGSLAREGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKGVWNAESGTDAYMQQGQVASAGSSLNPQGSLTLSGDLSKKTIDEVWRDMQQKKGVSQERERQPTVGEMTLEDFLVKAGVTTEPFSNEDSAMAMPGVDSQHNTSQHAHWLQYQLPSVQQQPQQQQHQHQNQQNSMMPGFSGFMAVQQPMPIVVNPVLDAGYSEAMPSSLMGALSDSQTAGRKRAASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSLLEEENERLKRQNEIEKVLPSAPPPDPKHQLRRTSSAPL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01331 316 CDD bZIP_plant_BZIP46 246 291 - -
Phco2g01331 316 Coils Coil 269 296 - -
Phco2g01331 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 249 264 IPR004827 GO:0003700|GO:0006355
Phco2g01331 316 SMART brlzneu 242 314 IPR004827 GO:0003700|GO:0006355
Phco2g01331 316 SUPERFAMILY Leucine zipper domain 246 292 IPR046347 GO:0003700|GO:0006355
Phco2g01331 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 289 IPR004827 GO:0003700|GO:0006355
Phco2g01331 316 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 244 296 - -
Phco2g01331 316 PRINTS cAMP response element binding (CREB) protein signature 279 296 - -
Phco2g01331 316 PRINTS cAMP response element binding (CREB) protein signature 141 156 - -
Phco2g01331 316 PRINTS cAMP response element binding (CREB) protein signature 241 257 - -
Phco2g01331 316 PRINTS cAMP response element binding (CREB) protein signature 259 279 - -
Phco2g01331 316 Pfam bZIP transcription factor 246 291 IPR004827 GO:0003700|GO:0006355
Phco2g01331 316 Gene3D - 244 296 - -
Phco2g01331 316 MobiDBLite consensus disorder prediction 246 266 - -
Phco2g01331 316 MobiDBLite consensus disorder prediction 289 316 - -
Phco2g01331 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 315 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01331 Phco-Chr2 41733345 41736643 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco2g01331 bZIP_1 2.7e-13 CL0018