Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01309 ATGGAGGGGGATCTAAGGCAGAAGCTGTTGAGGAAGGAGAGCAGAAACGATGAAGAGGAAGAAGAGTTATCATTGGCCAAGAGGGTGTGGAATGAGAGCAAGTTGATGTGGATAGTGGCAGCACCAGCCATATGCACTAGGTTCTCCACCTTTGGTCTCAATGTTATAACCCAATCCTTTGTTGGCCATATTGGCTCAAGGGAATTGGCTGCTTTTGCTCTCGTTTACACCGTTCTCGTTAGGTTCGCCAATGGCGTTCTCTTAGGGATGGCGAGTGCACTGTCAACACTTTGTGGGCAAGCATTTGGTGCAAAAGAATATAGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTTAACTGCACTTGTTCTTGTTCCTGTGTTCATCTTCACAAGCCCAATTTTGACACTTTTAGGCCAAGATGAGAGCATAGCACAAGTGGCAGGAACCATTTCTCTCTGGTCAATTCCTATCATGTTTTCTTTCATTTTGTCATTCACTTGCCAGACATTCCTGCAATCTCAAAGCAAGAACGTCATCATTGCATTCTTGGCAGCTTTTGCGATAGTGATTCATCTGTTTCTCTCCTGGCTTTTGACAATGAATTTCAAGCTGGGAATTCCTGGTGCAATGCTTTCAACAATTTTGGCATTCTGGATTCCCAACATTGGTCAACTCATATTTGTCACATGTGGTTGGTGCTCTGATACATGGAAAGGTTTCTCCTTTCTGGCATTCAAAGATCTAGGGCCTGTTGTCAAGATGTCCCTTTCAGCCGGTGCCATGCTATGTCTTGAACTCTGGTACAACACCATACTGGTTCTTTTGACCGGTAACATGAAAAATGCAGAGGTTGCAATTGATGCTCTATCCATATGTCTCAACATCAATGGATGGGAAATGATGATAGCACTCGGTTTCATGGCTGCAGCAAGTGTTCGAGTAGCAAATGAACTTGGAAAAGGAAGTGCCAAAGCTGCAAAGTTCTCAATAGTTGTGTCTGTGCTCACATCATTGACCATCGGATTCTTTCTGTTCTTATTCTTCTTATTTTTCAGAGAAAGACTTGCTTACATATTCACCTCAGATAAAGACGTGGCCTTTGCTGTTGGGGATTTGTCACCTTTGTTATCAATCTCTATTTTACTAAACAGTGTTCAACCTGTACTCTCAGGAGTGGCTATAGGAGCAGGGTGGCAAAGCATTGTGGCATATGTGAATCTGGGGTGTTATTACATCATAGGTATTCCTGTAGGTATTGTACTTGGTAATGTTCTCGATATGCAAGTCAAGGGAATCTGGATTGGAATGTTGTTTGGAACATTCATTCAAACAATAGTGCTGACTGTAATCACTTGCAAAACTAATTGGGAGGAGCAGGTTACCATTGCTCAAAAGCGTATTAGCAGATGGGCGAAGGCGGAAAGTTCTGATCAAGAAAATGAAAGAGAGAGAAAATATGTTAGCTAA 1482 0.4231 MEGDLRQKLLRKESRNDEEEEELSLAKRVWNESKLMWIVAAPAICTRFSTFGLNVITQSFVGHIGSRELAAFALVYTVLVRFANGVLLGMASALSTLCGQAFGAKEYSMMGVYLQRSWIVLFLTALVLVPVFIFTSPILTLLGQDESIAQVAGTISLWSIPIMFSFILSFTCQTFLQSQSKNVIIAFLAAFAIVIHLFLSWLLTMNFKLGIPGAMLSTILAFWIPNIGQLIFVTCGWCSDTWKGFSFLAFKDLGPVVKMSLSAGAMLCLELWYNTILVLLTGNMKNAEVAIDALSICLNINGWEMMIALGFMAAASVRVANELGKGSAKAAKFSIVVSVLTSLTIGFFLFLFFLFFRERLAYIFTSDKDVAFAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNLGCYYIIGIPVGIVLGNVLDMQVKGIWIGMLFGTFIQTIVLTVITCKTNWEEQVTIAQKRISRWAKAESSDQENERERKYVS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01309 493 Coils Coil 2 29 - -
Phco2g01309 493 CDD MATE_eukaryotic 32 465 IPR045069 GO:0042910|GO:1990961
Phco2g01309 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 461 - -
Phco2g01309 493 NCBIfam MATE family efflux transporter 42 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco2g01309 493 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco2g01309 493 Pfam MatE 265 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01309 Phco-Chr2 41246936 41250013 Tandem