Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01308 ATGCACCATAGTAGATTGGTGGAGATGGGAGCAGAGGTAAATGAGAAGCTTTTGCATGAGAGAAAGAACAATTCTTTGGAAGAAGAGGAAGAGTCAGTGGGGAAAAGGGTATGGGAAGAAAGCAAGAAGATGTGGGTGGTAGCAGGCCCTGCCATATTCACAAGGTTTTCAACTTTTGGGATTGTGGTGGTTAGTCAATCCTTCATTGGCCATATTGGCTCAACTGAACTAGCTGCATATGCCCTTGTTATGACTGTCCTAGTCAGGTTTTCAAATGGGGTATTGATTGGCATGGCAAGTGCTTTGGAAACTCTTTGTGGTCAAGCATATGGGGCCAGTAAGTATGACATGCTTGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCACAACCTCTATACTCCTTCTTCCGATTTACATCTTCACCACCCCTTTGTTAGAGGCTCTAGGCCAAGACAAAACCATTGCTCGTGTTGCTGGAACCATTTCTCTCTGGTCAATTGGTATCATGTTTTCTGTCTCAATGTCATTCACCTGCCAAATGTTCCTGCAATCACAGAGCAAGACCAAGATCATTGTCTACCTTGCAGCAGTTTCAATTTCACTCCATGTTTTCCTGTCATGGCTTTTAACTGTTCAGTTCAAGTTTGGGCTCAACGGTGCACTCACATCAACGCTTTTGGCATATTGGATTCCAAACTTGGGCCAGCTTGTGTTTATCATGACCAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTCTGGTCTGTTATCAAGCTTTCCCTCTCTTCTGGAGCTATGTTATGTCTTGAGATCTGGTACAACACAGTTTTGATTCTTCTTACAGGCAACATGGAAAATGCAGAAGTTTCCATTGATGCTCTGGCCATATGCCTCAACATTAATGGATGGGAAATGATGATAGCTCTTGGTTTCTTTGCTGCTGCAGGTGTGCGGGTTGCAAATGAGCTTGGAAGAGGGAGTTCAAAGGCTGCAAAATTTTCCATTCTGATAACAGTTCTGACATCATTTGTGATTGGATTGGTGCTATTTTTGATGTTTCTGTTTCTGAGGGAAAGACTTGCTTATATTTTCACTACAGACCCTGAGGTGGCTAAAGCAGTTGCTGATTTATCACCATTGCTCTCATTTTCCATCTTGTTGAACAGTGTCCAACCTGTGCTCTCTGGAGTTTCTGTGGGAGCTGGGTGGCAAAGCACTGTAGCATATGTAAACATTGCCTGTTATTATCTCATTGGTATTCCTGTTGGAGTGCTGCTTAATAATCTTCTCCATTTGGATGTCAAGGGTATTTGGATTGGAATGATGTTTGGAACATTTGTTCAGACCATTATGCTTATTACAATCACATTGAAAACGGATTGGGACAAGCAGGTAGAGCTTGCTCGAAATCGTGTTAACAAATGGACATTGGTGGAGAACAAAGAATCAAACACTAGACCAAGCATATCTAGCTAA 1497 0.4242 MHHSRLVEMGAEVNEKLLHERKNNSLEEEEESVGKRVWEESKKMWVVAGPAIFTRFSTFGIVVVSQSFIGHIGSTELAAYALVMTVLVRFSNGVLIGMASALETLCGQAYGASKYDMLGVYLQRSWIVLFTTSILLLPIYIFTTPLLEALGQDKTIARVAGTISLWSIGIMFSVSMSFTCQMFLQSQSKTKIIVYLAAVSISLHVFLSWLLTVQFKFGLNGALTSTLLAYWIPNLGQLVFIMTKCPDTWKGFSFLAFKDLWSVIKLSLSSGAMLCLEIWYNTVLILLTGNMENAEVSIDALAICLNINGWEMMIALGFFAAAGVRVANELGRGSSKAAKFSILITVLTSFVIGLVLFLMFLFLRERLAYIFTTDPEVAKAVADLSPLLSFSILLNSVQPVLSGVSVGAGWQSTVAYVNIACYYLIGIPVGVLLNNLLHLDVKGIWIGMMFGTFVQTIMLITITLKTDWDKQVELARNRVNKWTLVENKESNTRPSISS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01308 498 PANTHER MULTIDRUG RESISTANCE PROTEIN 34 468 - -
Phco2g01308 498 Pfam MatE 272 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco2g01308 498 Pfam MatE 50 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco2g01308 498 CDD MATE_eukaryotic 40 473 IPR045069 GO:0042910|GO:1990961
Phco2g01308 498 NCBIfam MATE family efflux transporter 50 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01308 Phco-Chr2 41227277 41230507 Tandem