Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01291 ATGGGTTCTTCTTCATGGTGCTTCAATAATGTTGTTGGTGAAGGTTTCAATGGAGTCATGGGTTTCATCCCTTCTTCTTTTCACGTGGGTTCACAACCTCCGCCCTTGGGTCACGACAAGGGGGTTTTGGGTCCAAACCTTGAGATGAGTCTTCAGATGTTGGGCCCTTCAATGGTTCAGCCGCAGGAGAGCAGGGAGAAAAAGAGAACCAGTGATGAAGGGGTTGCAAACAAGAAGTTGTCTTTGAAACGTGGGGAAGAAGAAGAAACTCACGGCTCCATTTCAGGAAAAATGGGGTTCACCAAGCTTTGTGCCAGAGGCCACTGGAGGCCAGCAGAAGATGACAAACTTAAGGAGCTTGTGGCCCAATATGGTCCCCAAAACTGGAACTTGATTGCTGAACATTTAGAAGGAAGATCAGGAAAAAGTTGTAGATTGAGGTGGTTTAATCAGTTAGATCCTAAGATCAACAAAAAGTGTTTCTGTGAGGAGGAAGAGGAAAGGCTTTTGACTGCTCATAAAATCTATGGTAGCAAATGGGCCATGATTGCTAGGCTATTTCCTGGAAGGACAGATAATGCAGTGAAGAACCATTGGCATGTGATAATGTCTAGGAGGCAGAGGGAGCAGTCTAGTGGCGTGTATAGAAGGAGAAAACCTCATATCAATGAATCTTTTTTAAAGGGTTTGAATCTGACACTGTCTAACAATGCTACTAGTGATGAGTCAACCATCTCAAACACCATTGATGAATCTGCCTCAACATGCACCAATCTCTCCCTAACTCCCTCTTCAGCCAAGTTGAATCCTCCTTTTGGACTCTTACACCAACCAGGAGAATCTAGAGAGGATGTGTGGTTGAACAAGTATTTTGGTGGTTGGAACGGGTCAGAAGCTGTGGGAAAAAGGCTAATGGGTGTGGACCAGGCTAGTTTTTCAGATACAAACTCAGAAGTATCGGTATCTGAGTCAGTTGTCACCAACAGGTCCAATCTCTCAATTTCTGAAGAGAAAGAGAGTGAAACTATGGGTGATAAGATTAACATGTCATTCATTGATTTTCTTGGAGTAGGAACTACTTAG 1083 0.4386 MGSSSWCFNNVVGEGFNGVMGFIPSSFHVGSQPPPLGHDKGVLGPNLEMSLQMLGPSMVQPQESREKKRTSDEGVANKKLSLKRGEEEETHGSISGKMGFTKLCARGHWRPAEDDKLKELVAQYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPKINKKCFCEEEEERLLTAHKIYGSKWAMIARLFPGRTDNAVKNHWHVIMSRRQREQSSGVYRRRKPHINESFLKGLNLTLSNNATSDESTISNTIDESASTCTNLSLTPSSAKLNPPFGLLHQPGESREDVWLNKYFGGWNGSEAVGKRLMGVDQASFSDTNSEVSVSESVVTNRSNLSISEEKESETMGDKINMSFIDFLGVGTT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01291 360 Gene3D - 161 221 - -
Phco2g01291 360 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Phco2g01291 360 PANTHER MYB PROTEIN-RELATED 106 250 - -
Phco2g01291 360 MobiDBLite consensus disorder prediction 62 93 - -
Phco2g01291 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 207 IPR017930 -
Phco2g01291 360 SMART sant 157 205 IPR001005 -
Phco2g01291 360 SMART sant 105 154 IPR001005 -
Phco2g01291 360 FunFam MYB transcription factor 106 157 - -
Phco2g01291 360 SUPERFAMILY Homeodomain-like 106 199 IPR009057 -
Phco2g01291 360 Gene3D - 106 157 - -
Phco2g01291 360 ProSiteProfiles Myb-like domain profile. 106 152 IPR001005 -
Phco2g01291 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 156 IPR017930 -
Phco2g01291 360 MobiDBLite consensus disorder prediction 57 94 - -
Phco2g01291 360 CDD SANT 109 150 IPR001005 -
Phco2g01291 360 CDD SANT 169 200 IPR001005 -
Phco2g01291 360 Pfam Myb-like DNA-binding domain 106 152 IPR001005 -
Phco2g01291 360 Pfam Myb-like DNA-binding domain 160 201 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01291 Phco-Chr2 40900095 40902164 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco2g01291 Myb_DNA-binding 9e-16 CL0123