Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01284 ATGTCTGAGACAAAGAAGGATCCGGGTATCAGGCTATTTGGCCGGAAGATTCTGGTGCCGGAATGTCAGATTCCGGCCAACTCTGGACCCACGGATGCTTGCAGCAGCATAAAAAAGGCAGAACTGGAAATGCCTAATGAATGTGGAGAAAACTCTGAAAAACAAGAAAAGTCTTGTGATTCAAGGGATAGTAAACAACAGTTCCAACATAAAGTGCAGGAAAATGAGCCAATAGTAAACCCCAAACCAGTGGAAGATAATACGGAGAATGGTGATTCAGACCAAGATAAAGTCTTGAAGAAACCAGACAAGATTCTTCAGTGTCCACGATGTAACAGTTTGGACACCAAGTTTTGTTATTTTAACAACTACAACGTTAACCAACCCCGGCATTTCTGCAAGAACTGTCAAAGGTATTGGACTGCTGGTGGAACAATGAGAAATGTTCCCATAGGAGCTGGGAGACGGAAGAATAAACACCTAGCGTCTCAGTACCGACACATTATGGTCTCTAACGGAATTCCTACCTCCAGACTACAAACTGAGGACACATCTGGTTTCCAACATGTCACAAGTCTTGAATCCTCAGTTCCTTTCAGGTCTTCAGCAGATAACAACAGCACTGTTTTGAAATTTGGGCCAGATAACCCTCTTTGTGAATCAATGGATTCAATGCTTAATCTTAGAGACGAGAGAAGATGTGTTGATGCAAGTTCTATAAACCGTGTAGAGTATGCTGGGGAACCATCTTTATGTGGATCTTCTGTGACGAATAATGGTACTCAAGGAAATGAATTATCAGAACATAAGACATCAAATTGGTTACAATGTTACCCTGTTCCTCCATGGGTATTGCCTTATCCAGGTTGGAATAATGTGAATACCATGGAAGTAGTTCATCAGTCTTCAGCACCAATGTGTAGTCCATACAACACTGGTCCTGCAGCAATGCAATGGTGTCCCACAGCAATGGTGGCAATTCCTGGCATGTGCCCACCAAGCATTCCTTTGCAACTTGTACCACCATCATGCTGGAGTGGAACACCACTTTGGAATGCTGGAACTGGGGCAGTGTCCATAGGATCCAATGCTTGCCTTTCGCCGTCTTCCTCCACGAGTAACAGTTGCTGCTCGGGCAATGGCTCCCCAACCCTTGGCAAACACGCTAGAGAAACGGTTTTTGCTGATGAAGAGAAATCAGAGAAGTGTGTTTTGGTTCCAAAGACCATCAGAATTGATGCCGCAAAAAGTCCTATAAGGGCTGCATTAACCATGAAGCCTGATCAACAGCAATCTCTATCAAATGGTGATATTTTGAAGAAAATTGAACCAAAAGAAGGCAAAGATCGCATATTGGGTGCCTCTCAAATCTTGGAAGCCAATCCAGCAGCTATTTCTCGTGCTCATGCATTTCAGGAGAGCATATAG 1428 0.437 MSETKKDPGIRLFGRKILVPECQIPANSGPTDACSSIKKAELEMPNECGENSEKQEKSCDSRDSKQQFQHKVQENEPIVNPKPVEDNTENGDSDQDKVLKKPDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRHIMVSNGIPTSRLQTEDTSGFQHVTSLESSVPFRSSADNNSTVLKFGPDNPLCESMDSMLNLRDERRCVDASSINRVEYAGEPSLCGSSVTNNGTQGNELSEHKTSNWLQCYPVPPWVLPYPGWNNVNTMEVVHQSSAPMCSPYNTGPAAMQWCPTAMVAIPGMCPPSIPLQLVPPSCWSGTPLWNAGTGAVSIGSNACLSPSSSTSNSCCSGNGSPTLGKHARETVFADEEKSEKCVLVPKTIRIDAAKSPIRAALTMKPDQQQSLSNGDILKKIEPKEGKDRILGASQILEANPAAISRAHAFQESI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01284 475 PANTHER CYCLIC DOF FACTOR 2 1 474 IPR045174 GO:0003700|GO:0006355
Phco2g01284 475 MobiDBLite consensus disorder prediction 45 98 - -
Phco2g01284 475 Pfam Dof domain, zinc finger 103 160 IPR003851 GO:0003677|GO:0006355
Phco2g01284 475 ProSitePatterns Zinc finger Dof-type signature. 108 144 IPR003851 GO:0003677|GO:0006355
Phco2g01284 475 ProSiteProfiles Zinc finger Dof-type profile. 106 160 IPR003851 GO:0003677|GO:0006355
Phco2g01284 475 MobiDBLite consensus disorder prediction 45 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01284 Phco-Chr2 40678968 40681299 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco2g01284 zf-Dof 2.9e-32 No_clan