Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01260 ATGACAACGTACGACCCAATGGCAGAGAGCAGCATGGGTCTGACGTCTCTGACGGATTCACTGTCTGTAACAGAGACAATGAATGGGACACACAATTTTGAGCTGAAGGGGTACTCTCTAACGAAGGGAATGGGCATTGGGAAATTCATCACAAGCGAGACATTCATAGTGGGAGGGCACCAGTGGGCCATATACTTCTACCCAGATGGCAAGATGCCCAGTGACAATGGTGTTTATGTTTCCATCTTTGTGGCACTTGTTTCCGAGGACGTCGATGTTCGTGCACTGTTCGAACTCAAGTTGCACGACCAAAGCGGCAAAGGGAATGATTTGGTTTACAGCCACTTCGGTCGCAACCTCGAGAATGGCCCTTACACTATCAAAAGCCGTGGCTGCATTTGGGGATATAAGCGGTTTTTCAAACGAAAAGATCTCGAGGCATCAACTTTCATCAAGGATGACAGCTTGAAGATCAGTTGCACTGTTGGTGTTCTGGTGATGTCGTGTAGTGATTCTTCTATGTTAAACGCAATACATGTTCCTGAATCTGATATAGGAGAAGATTTAGGGATGATGTTAGATTGTGAGGAATTATGTGATGTTACTTTCTTCGTCGGTGGGGAAAGGTTTCGTGCACACAAGCTTATTTTGGGTACTAGGTCAACAGTGTTTGAAACCTGGTTTTCCAATGGGTTAGGGAAGGATGATAGGGTGATAGTTCTCAATGAGATGGAGCCTAAAGTTTTCAAGGCTTTGCTTCATTTTATATACAAAGACACTCTAATGGAAGATGAAGAGCTCTTTCTGTGGCAATCATTATCATATTCTTCAATATTAGAATCATTTCCGGCAAAGTTATTAGCTGCAGCGGAAAAGTTTGACTTGCCAAGATTGAAGCTCATGTGTGAATCAATATTTTGTAGTGACATATCTATATATTCTGTTCCATATATTCTGGTTCTTGCAGATCGTTATCATGCTACTGAGTTGAAGTCCATCTGTCAAAAATTTTGTGCTGAAAACTATGATGCTGTCAAGAAATCTGGTGGTTTGGAGTATCTCAGGCAAAATTGTCCGTTGGTGCGAGCAGAACTGCTAAGCATTGCGGTTGGCTTGGACAAATTTATTGTGACCGATGATAAGAAAGAACCAACCTTAGAAAGAGGTGAAAGTTCCAAGGTTCACATTTCTGATGCTGATAACAACAACAATAATCCATTAGGGGTTACTTTCAAGATTTGGAATGGTCAAGGAAACTAG 1260 0.4198 MTTYDPMAESSMGLTSLTDSLSVTETMNGTHNFELKGYSLTKGMGIGKFITSETFIVGGHQWAIYFYPDGKMPSDNGVYVSIFVALVSEDVDVRALFELKLHDQSGKGNDLVYSHFGRNLENGPYTIKSRGCIWGYKRFFKRKDLEASTFIKDDSLKISCTVGVLVMSCSDSSMLNAIHVPESDIGEDLGMMLDCEELCDVTFFVGGERFRAHKLILGTRSTVFETWFSNGLGKDDRVIVLNEMEPKVFKALLHFIYKDTLMEDEELFLWQSLSYSSILESFPAKLLAAAEKFDLPRLKLMCESIFCSDISIYSVPYILVLADRYHATELKSICQKFCAENYDAVKKSGGLEYLRQNCPLVRAELLSIAVGLDKFIVTDDKKEPTLERGESSKVHISDADNNNNNPLGVTFKIWNGQGN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01260 419 SMART BTB_4 199 310 IPR000210 GO:0005515
Phco2g01260 419 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 22 364 IPR045005 GO:0016567
Phco2g01260 419 Gene3D - 309 374 - -
Phco2g01260 419 CDD MATH 29 162 IPR002083 GO:0005515
Phco2g01260 419 SUPERFAMILY TRAF domain-like 25 166 - -
Phco2g01260 419 SUPERFAMILY POZ domain 178 308 IPR011333 -
Phco2g01260 419 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 27 165 IPR008974 GO:0005515
Phco2g01260 419 SMART math_3 35 145 IPR002083 GO:0005515
Phco2g01260 419 Pfam BTB/POZ domain 192 308 IPR000210 GO:0005515
Phco2g01260 419 Gene3D Potassium Channel Kv1.1; Chain A 175 304 IPR011333 -
Phco2g01260 419 CDD BTB_POZ_BPM_plant 185 307 - -
Phco2g01260 419 ProSiteProfiles MATH/TRAF domain profile. 28 162 IPR002083 GO:0005515
Phco2g01260 419 ProSiteProfiles BTB domain profile. 199 265 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01260 Phco-Chr2 39887136 39888744 Tandem