Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01246 ATGAGTAATCAGCCACAAGAGAATGTTAATGAAGGCACTTCCAGCAGAGCAAATAAGCACAAAGACAAGGTCTCAAACCGTGTCAGGTCACGAGCATCATCTCCTCCATGCGCAGCATGCAAGAAAATGAGGAAAAAGTGCAGCAGTGACTGCATCTTTGCACCTTATTTTGGTTCTAGCGAGGGCTCAACAAGGTTTGAAGCAGTGCACAAGGTGTTTGGTGCAAACAACTTGTCAAAACTATTGCTAGAAGTTGAAGTGGTTCATCGTAATGAGGTCATAAATTCCATGTGCTACGAGGCTCAAGCAAGGCTAGCCAATCCTGTTCATGGTTGTGTCTCCACCATTTCTGCTTTACAACAACAGGTGGCATTGTTGCAAGGAGAACTTGTTATGGTTCAAAATCAATTGATTAATACAAAAAATTTATATGAAAGTCTTCTTCAGAGAACATATCAATACCAACAACAACCACACAACAATGTAGTTACGCAACCTACACAGTCCAACAATTTGCCTCCTTCTGCCAATAGCCTGATGAACATGAGCTTCTTTAACCCTGGTTTTGATCACCTTGCAATGCAGACAACACCTTCAGCAAACAACATGGAGCCTCATCAGTTTTGTGGGCTTCCCCATTTCAACAATGACATAACGCATCTATTTCCATGA 672 0.4196 MSNQPQENVNEGTSSRANKHKDKVSNRVRSRASSPPCAACKKMRKKCSSDCIFAPYFGSSEGSTRFEAVHKVFGANNLSKLLLEVEVVHRNEVINSMCYEAQARLANPVHGCVSTISALQQQVALLQGELVMVQNQLINTKNLYESLLQRTYQYQQQPHNNVVTQPTQSNNLPPSANSLMNMSFFNPGFDHLAMQTTPSANNMEPHQFCGLPHFNNDITHLFP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01246 223 MobiDBLite consensus disorder prediction 1 34 - -
Phco2g01246 223 Coils Coil 116 136 - -
Phco2g01246 223 PANTHER LOB DOMAIN CONTAINING PROTEIN 34 169 - -
Phco2g01246 223 Pfam Lateral organ boundaries (LOB) domain 36 134 IPR004883 -
Phco2g01246 223 ProSiteProfiles LOB domain profile. 35 137 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01246 Phco-Chr2 39593042 39596338 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco2g01246 LOB 5e-35 No_clan