Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01245 ATGGCAAATAGACACCATCCCTCAGTGTTTTTGGTGTTAGTTACTTTTTTGCTTTCTATCTACTACTCAGAGCAATTACAATCTTCTCACTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAACTTTCCTGCTGCTTTGAGCAACTGGAGCAACGAAACCGATTTTTGCAACACAGATTCAAATTCTTCGCTCTCTGTAGTGTGCTATGAAGACACCATAACACAGCTTCACATAATAGGTGAAAGAAGAGATTCACCTCTCCCTAGAAATTTCTCAATAAATTCCTTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTCTGGGTATTTGGGGTCCTTTGCCTGGTAAGATATCTCGTTTGTCATCCCTGGAAATAGTTAACATGAGTTCCAATTTTCTCTATGGTCCTATTCCTCAGGAACTTTCTTCACTGACAAATCTCCAAACACTCATATTTGACAACAACATGCTGGCTGAAACATTTCCTCCTTGGCTTGATTCACTTCCAGCCTTAACTGTGCTAAGTTTGAAGAATAACTTGTTCAATGGATCTCTACCGAACTCCCTTGGTAATGTGGAGAATTTGAGAGCTCTTTCACTTTCCCATAATCACTTTTATGGGGTGGTACCTGATTTTAGTCGTTTGACGAATCTTCAAGTGCTTGAATTGGATGATAATGCCTTTGGACCTGAGTTTCCTCAACTTGGTAACAAGTTGGTCACACTAGTGCTAAGACACAATAGGTTCAGGGATGGTATTCCTGCTGAATTGAGCTCATACTATCAGCTTGAACGTTTGGATATATCATCAAATGCATTGGTGGGGCCATTTCAGCCAGGATTGTTGTCACTTCCTTCTATTACTTATCTGAATATTTCTGATAACAAATTAACTGGGATGCTTTTTGAGAATCTGTCCTGCAATTCAGAGCTTGATGTGGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAAATGTTTAGTGTCAAATTCCAGTGATAGGACTTTCCATTATGCTAGAAATTGTCTAGACACTGCGAATCAAAATCAGCAGCCGCAACCTTTTTGCCACACTGAGGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAGACAAGTATCTAAGGTAGTTCTTTCCCTAGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTGTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGCTAGAACCAAAATGAAGAATCCTCCAACAAGATTAATATCAGAAAATGCTGCTTCTGGTTACACTTCTAAGTTGCTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTACCAACTTATCGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGTTTCTTTGATGGGTGAAGATTCCTATGGAAAGATGTACAGAGGTCAGCTGAAGAATAGTTCGGTCGTTGCTATTCGATGTGTAGAAATGAAAAAGAAATACAGCACTCAAAACTTTGTGAACCACATAGAGCTGATATCAAAACTCAGGCATCGTCACTTAGTCAGTGCTATTGGACACTGCTTTGAATGTTCTTTGGATGATTCGAGTGTCAACAAAGTGTTTCTTGTCTTCGAATACGTACCAAACGGCACGCTCAGGAATTGGATCTGTGATGAGAATGCAAGAAAAAGCTTGAATTGGACCCAACGCATTGGAGCTGCAATTGGAGTGGCAAAGGGAATCCAGTTTTTGCACACAGGGATTGTCCCTGGTGTATATTCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCGAAAATCAGCAGTTATCACCTGCCTTTGTTATCTAACATGGGGAAGGTTCGGCATGGAAATTCTTCAAGTGGATTAAAACATTCTAGCAACAATAAAAGTGTAAAGCATGGAGATAAGTCTGATATATACGACCTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGCAAATAAGGAAAGCGAATGATGCAGACGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAGTGTGGTTGATCCAGCAATTCGTAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATATGTGTGAGGTGTCTGGTTAAAGAGGCAGAAGATAGGCCCTCCATAGAAGATGTTTTGTGGAACTTGCAGTTTGCATCTCAAGTGCAGGATGCATGGAGAGGGGATTCACAAAGTAGTGAAGGGTCACCAGGCTCAGAATCTGGAGGACTTCCCTTTCATTAG 2346 0.4084 MANRHHPSVFLVLVTFLLSIYYSEQLQSSHSQTLLRIQQLLNFPAALSNWSNETDFCNTDSNSSLSVVCYEDTITQLHIIGERRDSPLPRNFSINSFVTTLVRLPSLKVLTLVSLGIWGPLPGKISRLSSLEIVNMSSNFLYGPIPQELSSLTNLQTLIFDNNMLAETFPPWLDSLPALTVLSLKNNLFNGSLPNSLGNVENLRALSLSHNHFYGVVPDFSRLTNLQVLELDDNAFGPEFPQLGNKLVTLVLRHNRFRDGIPAELSSYYQLERLDISSNALVGPFQPGLLSLPSITYLNISDNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPKCLVSNSSDRTFHYARNCLDTANQNQQPQPFCHTEALAVGILPERKKHRQVSKVVLSLGIVGGTLGGVALVLLIFFIVRRGNARTKMKNPPTRLISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTVSLMGEDSYGKMYRGQLKNSSVVAIRCVEMKKKYSTQNFVNHIELISKLRHRHLVSAIGHCFECSLDDSSVNKVFLVFEYVPNGTLRNWICDENARKSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGLKHSSNNKSVKHGDKSDIYDLGVILLELILGRQIRKANDADAFRDLLQASLGADEEGRRSVVDPAIRKACLDQSLKTMMEICVRCLVKEAEDRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESGGLPFH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01245 781 Pfam Protein tyrosine and serine/threonine kinase 482 747 IPR001245 GO:0004672|GO:0006468
Phco2g01245 781 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Phco2g01245 781 SUPERFAMILY Protein kinase-like (PK-like) 459 754 IPR011009 -
Phco2g01245 781 MobiDBLite consensus disorder prediction 760 781 - -
Phco2g01245 781 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Phco2g01245 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Phco2g01245 781 PANTHER UNNAMED PRODUCT 98 680 - -
Phco2g01245 781 SUPERFAMILY L domain-like 33 353 - -
Phco2g01245 781 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Phco2g01245 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Phco2g01245 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 245 362 - -
Phco2g01245 781 Gene3D Ribonuclease Inhibitor 27 244 IPR032675 -
Phco2g01245 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 244 - -
Phco2g01245 781 Gene3D Ribonuclease Inhibitor 245 363 IPR032675 -
Phco2g01245 781 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01245 Phco-Chr2 39540976 39545936 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Phco2g01245 PK_Tyr_Ser-Thr 2.1e-21 CL0016