Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01193 ATGCTGCCGGTGAGTGTGTGCGGCGACGGTTGTGAGGAATTCTGCCATACTTTGGGAGCTACTCAAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGAGATCTTCAGCCTGGTCCACTACCTATTGAGCAAGGAGAGAATTGGGCACAACCTGCTCAGAATCGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTGAAGTGTTACCAGAACCTGTTGCTTTAGGGGCTCCAGAACCAGTTTACAATCACGTAGAGGTAGTGGCCAATAATAACATTGCGATGGAGGGTGGAAGTGCAGATAAGGTGGCTGTAGCTGAGGAAGAACCCAGCACAACTCCTGTCCCAGAAAGGGTACAAGTTGGTAACTCTCCTATATATAAGATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGTCAAGTTTATGTTGGTCGAAGGTTAAGTGGTGGCTCTGATCGAACAGGTCCTGATGCGGTTGAGGTTGCACTTAAGTTTGAGCACAGAAACAGTAAAGGTTGCAATTATGGGCCTCCTTATGAGTGGCAAGTTTACAGTACTTTGAATGGCTGTTATGGAATTCCCTGGGTTCATTACAAGGGCCGTCAAGGAGATTTCTACATTTTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGCCAATCAATCTCACCTAGTATGGCTGCGTGCATTGCCGTAGAGGCTATATCAATTCTGGAGAAGCTCCACTTGAAAGGGTTTGTGCATGGAGATGTGAAACCAGAAAACTTTCTGCTTGGCCAACCCGGATCAGCTGATGATAAGAAACTATATCTTATTGATCTTGGTCTAGCTTCTAGATGGAAGGATGCATCATCTGGTCTACATGTTGATTATGACCAGAGACCTGATATATTCAGGGGAACGATAAGGTATGCTAGTGTGCATGCACATTTGGGTAGGACTGGAAGTCGAAGGGATGATCTTGAGTCTCTGGCATACACACTAATATTTCTCATAAAAGGGAGATTACCTTGGCAGGGTTATCAGGGTGACAACAAAAGCTTTCTTGTTTGTAAGAAAAAGATGGCCACTTCCCCGGAGTTGATGTGTTGCTTCTGTCCTGCCCCATTTAAGCAGTTTCTTGAAGCTGTTACTAATATGAGATTTGATGAGGAGCCGAATTATTCCAAGCTTATATCATTTTTTGAAAGCTTGATCGAGCCATGCACTCCATTGAGACCTATCAGAATAGATGGAGCTTTAAAGGTTGGTCAAAAAAGAGGTAGGATGCTTATAAATCTGGAAGAAGATGAACAACCTAAGAAGAAAGTGCGATTGGGGAGTCCTGCTACTCAATGGATATCAGTGTATAATGCACGTCGTCCCATGAAGCAGAGATATCACTATAATGTTGCAGACAGTAGGCTCCGACAACATGTCGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTTCAGCAAATTTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCACAAGTTTATGAGTTATCACTGGCCTTCCTGCACAAGGATTGGATAATGGAGCAATGGGAGAAAAATTACTACATCAGTTCAATCGCCGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACACAGCAGTCCTACAAAGTCAGCGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCAATGACTACTGCTGGCAGTCGCTGGGGTGTTGTTATGTCCAGGAATTCTGGGTATTCTGATCAGGTTGTGGAGATTGACTTTTTGTATCCAAGTGAAGGAATCCATCGTCGATGGGAGAATGGTTACCGGATTACTTCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAGGAGACGCTTCGTACTTCTGCTTTTCCTAGTACCCATGTTAAGGAAAAATGGGCCAAGAATCTCTACATTGCCTCTATATGTTATGGGCGAACTGTTTGCTAG 2220 0.4505 MLPVSVCGDGCEEFCHTLGATQVGYDLNGERMPELRSGARRSKRLGDLQPGPLPIEQGENWAQPAQNRTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALGAPEPVYNHVEVVANNNIAMEGGSADKVAVAEEEPSTTPVPERVQVGNSPIYKIERKLGKGGFGQVYVGRRLSGGSDRTGPDAVEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSISPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSADDKKLYLIDLGLASRWKDASSGLHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADSRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSLAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNSGYSDQVVEIDFLYPSEGIHRRWENGYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01193 739 FunFam Casein kinase 1-like protein 150 498 - -
Phco2g01193 739 ProSiteProfiles Protein kinase domain profile. 178 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01193 739 SMART serkin_6 178 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01193 739 SUPERFAMILY Protein kinase-like (PK-like) 178 466 IPR011009 -
Phco2g01193 739 Gene3D Transferase(Phosphotransferase) domain 1 143 495 - -
Phco2g01193 739 Pfam Protein kinase domain 178 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01193 739 MobiDBLite consensus disorder prediction 36 103 - -
Phco2g01193 739 CDD STKc_CK1 178 452 - -
Phco2g01193 739 ProSitePatterns Protein kinases ATP-binding region signature. 184 215 IPR017441 GO:0005524
Phco2g01193 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Phco2g01193 739 PANTHER CASEIN KINASE-RELATED 178 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01193 Phco-Chr2 37992838 37999226 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Phco2g01193 Pkinase 7.8e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01193 2 37992838 37999226 Phco2g01193 2 37992838 37999226 ECH