Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01165 ATGGGATCTGGCAATGAGGTTCACTCAGTTGTGGAGTTTATTCTCGATGCAAAGTGGGTTATAGATCCCAAGCAACTATTTGTTGGACCAAAAATTGGGGAAGGTGCCCATGCCAAAGTGTACGAAGGAAAATATAAAAATCAGAATGTTGCTGTTAAGATTATTAATAAGGGTGAAACCCCAGAACAGATTTCTAGGAGAGAGGCTCGGTTCGGCAGAGAAATTGCAATGTTATCTAGAGTTCAACACAAAAATCTAGTTAAGTTTATTGGGGCCTGCAAAGAACCAGTTATGGTTATTGTAACTGAACTTCTGTTAGGGGGAACTTTGCGCAAATACCTGTGGGGTATCCGGCCAAACTGCTTGGATATGCGGGTGGCAGTTGGATTTGCTCTTGATATTGCCCGAGCAATGGAATGCTTACACTCTCATGGGATCATTCATCGTGACCTTAAACCTGATAACCTGATTTTGACAGAAGATCATAAAACCGTTAAACTTGCCGATTTTGGTCTAGCCAGAGAAGAGTCCTTAACAGAGATGATGACTGCTGAGACAGGGACATATCGTTGGATGGCTCCAGAACTTTACAGCACTGTCACTCTAAGACAAGGGGAGAAGAAGCATTACAACCATAAGGTGGATGCTTACAGTTTTGCTATAGTGTTGTGGGAGCTCGTCCATAATAGGTTGCCTTTTGAAGGCATGTCAAATCTACAGGCTGCATATGCAGCTGCATTTAAGAATACAAGGCCTAGTGCTGAAGACCTCCCTGATGAATTAGCTCTAATTGTGACCTCTTGTTGGAAAGAGGATCCAAATGATCGACCCAATTTTAGTCAAATAATACAGATGTTGCTTCAATATCTAATTACCATTTCACCGGCCGATCCAGTTGTTCCAATGCGAATTGCATCATCCAAAAATGCCGTGTTGCCACCAGAATCTCCAGGTACAAGTGCTTTAATGGCTAGAAGAGATGATTCTGGAGAAACCCCAAAAGTTGATATTGAAGGCAGATCTAAATGGTGTTTCTTTTGCTCGAATCACTGTTACTGA 1059 0.4212 MGSGNEVHSVVEFILDAKWVIDPKQLFVGPKIGEGAHAKVYEGKYKNQNVAVKIINKGETPEQISRREARFGREIAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLWGIRPNCLDMRVAVGFALDIARAMECLHSHGIIHRDLKPDNLILTEDHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELVHNRLPFEGMSNLQAAYAAAFKNTRPSAEDLPDELALIVTSCWKEDPNDRPNFSQIIQMLLQYLITISPADPVVPMRIASSKNAVLPPESPGTSALMARRDDSGETPKVDIEGRSKWCFFCSNHCY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01165 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01165 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Phco2g01165 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Phco2g01165 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Phco2g01165 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Phco2g01165 352 MobiDBLite consensus disorder prediction 311 333 - -
Phco2g01165 352 Gene3D Transferase(Phosphotransferase) domain 1 107 297 - -
Phco2g01165 352 Gene3D Phosphorylase Kinase; domain 1 15 105 - -
Phco2g01165 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Phco2g01165 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01165 352 CDD STKc_MAP3K-like 32 286 - -
Phco2g01165 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Phco2g01165 352 SUPERFAMILY Protein kinase-like (PK-like) 16 307 IPR011009 -
Phco2g01165 352 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Phco2g01165 352 FunFam Kinase suppressor of Ras 1 15 105 - -
Phco2g01165 352 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 286 - -
Phco2g01165 352 FunFam serine/threonine-protein kinase HT1 107 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01165 Phco-Chr2 36288286 36299788 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco2g01165 PK_Tyr_Ser-Thr 3.6e-57 CL0016