Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01118 ATGGCTTGCGATTCTTCCCCTCACGGCCGCGTCCATCAGTTTGTGTCAGAGGGCACAGAATCAAAACCTTGTGACGCGAAATCAGCTGAAACGGTGACCCTTTTGATTAAGCACCTACCAGAAGACATTCCTCATGACACCCTTTCTCGAATCTTCGCAAATTTTGGTGCTTTCTTGGTGCGCCCTTGCTCTAGTGCCAGGTTGAAAAATTGTGCTTTTGTGGATTTCAAAAATGAAATGGTGGCATCTCAAGCACAACGGCAGCTAAATGGGTTGAGATTTCTTGGTAAAGTCTTGTCAGCAGAGAGAGCGAGTAAGTTAACTGGTAATGGTGAAAATAGTAGCAGTGATCAGCTGGGTAAGGACTCTATAACATCAATGCCGAGGAATGCAAATGTAAGCAAACTTGTTGATGGAGATACAAAATCAAGAGGCCTCCCTATTCCCGAGCCAATTGCTGATAGACTTGGTGTCCATTATCCCTTTCCTCCTCATCTTGAGTATGCTTACCCTCCACCTGATGGAAATATATTAACGAATATTGTGAATGCTCTAATTGCTGTTCCCCGCTTTTACACTCAGGTTCTACACTTGATGAACAAAATGAACATCCCTGCTCCATTTTGTATGGCACTGCGCACACCTCCATTACCTCCAGAAGTACCAGTACCACCTCCTCCTACTGTAACTATAAATCCTCAGTCTGCAGATCTGTCCAGTGGTGAATCGGAGATGGAATATTCGGATGAGGAGTACGAAGCAAGCACAAAAAAGTCTGGACAAAAGCGTGCCAGGCGTGAGACCATTGTTGGCCCTGCTATTGATAAAGGTGTGGCTCATGAGTCCGTTGGAGTAAAACCAGCCACCTTGGTCCCAAAAGAAATCCCTGTGATAAAAAAGAACCATGTGTTAAAGATAAACATTGTCCCCAAAGCAAAACTAAATAAACATACAGATGATGAGACAACACAAGAGTTACAAGAGCCAGAAAAAGATGCTCCAGATCCTAACAAATTTTTGACTCCAGATGAATTAGAGAAAGGAAAGTTGCCTCCTGAGGAAATCTTATCCCTTCCAATGTTTAAGAACTATACAGCTGGAAATCCTGCTCCTGTGTTGTATGTTAAGAATTTGGCAAAAGATGTGATTGCTGATGATTTATATTATATATTTGGGTCCTTGTTTGGAAGTGTTGAGGCTGCTAAGTCGGGTCTTCAAGTCAAACTAATGCAAGAAGGACGAATGAGGGGCCAAGCATTTCTGACATTCCCCTCTATTGAATTGGCTCATCTTGCTCTGAATCGGGTGAATGGATATGTAATAAAAGGAAAGCCAATGATTATACAATTTGGTCGAAATCCCGCTGCTGCCAAGGCTTGA 1380 0.4297 MACDSSPHGRVHQFVSEGTESKPCDAKSAETVTLLIKHLPEDIPHDTLSRIFANFGAFLVRPCSSARLKNCAFVDFKNEMVASQAQRQLNGLRFLGKVLSAERASKLTGNGENSSSDQLGKDSITSMPRNANVSKLVDGDTKSRGLPIPEPIADRLGVHYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFCMALRTPPLPPEVPVPPPPTVTINPQSADLSSGESEMEYSDEEYEASTKKSGQKRARRETIVGPAIDKGVAHESVGVKPATLVPKEIPVIKKNHVLKINIVPKAKLNKHTDDETTQELQEPEKDAPDPNKFLTPDELEKGKLPPEEILSLPMFKNYTAGNPAPVLYVKNLAKDVIADDLYYIFGSLFGSVEAAKSGLQVKLMQEGRMRGQAFLTFPSIELAHLALNRVNGYVIKGKPMIIQFGRNPAAAKA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01118 459 MobiDBLite consensus disorder prediction 315 346 - -
Phco2g01118 459 MobiDBLite consensus disorder prediction 232 267 - -
Phco2g01118 459 SUPERFAMILY RNA-binding domain, RBD 32 453 IPR035979 GO:0003676
Phco2g01118 459 PANTHER UNCHARACTERIZED 28 457 IPR045164 -
Phco2g01118 459 MobiDBLite consensus disorder prediction 106 132 - -
Phco2g01118 459 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Phco2g01118 459 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 99 IPR000504 GO:0003723
Phco2g01118 459 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 373 445 IPR000504 GO:0003723
Phco2g01118 459 MobiDBLite consensus disorder prediction 250 267 - -
Phco2g01118 459 FunFam U11/U12 small nuclear ribonucleoprotein 65 kDa protein 366 459 - -
Phco2g01118 459 Gene3D - 7 114 IPR012677 -
Phco2g01118 459 MobiDBLite consensus disorder prediction 105 147 - -
Phco2g01118 459 Gene3D - 366 459 IPR012677 -
Phco2g01118 459 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 371 453 IPR000504 GO:0003723
Phco2g01118 459 CDD RRM2_RBM40_like 372 451 - -
Phco2g01118 459 SMART rrm1_1 33 102 IPR000504 GO:0003723
Phco2g01118 459 SMART rrm1_1 372 449 IPR000504 GO:0003723