Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01012 ATGGGTAGCTGCCATTGTTTCGGGTTGAGGAAGAAGAGCAAAGGGAAGAGTGCCAATGCGCGGGACGAGGAAAACAAGAATCGTAAATCTGTAGAGAGAATCAATGATGTCTCTGCAAGTTTTTCAGGAAATGGACCAGAAGAAAACCCAAAAGAGGAGGGCGAAAGTCCTCATGAGGCCCGGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGAGATGAAACCTTTATTGGGCAAGGTGGATTTGGCATTGTTTACAAGGGAATGATTGGGGAAAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACAGGTGTCCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCCCTTCTACGCCATTCCAACCTTGTTAATATGATTGGTTATTGTGCGGAAGGGGATCAACGTCTTCTTGTGTATGAGTACATGGCTTTGGGATCCCTAGAATCTCATCTTCATGATGTTTCTCCTGATGAAGAACCACTTGATTGGAATACCAGAATGATGATAGCCTGTGGGTCAGCAAAAGGACTCCATTATCTGCACGATGAAGCAAAGCCCTCTGTTATATACAGGGATCTTAAAACTTCCAACATACTACTGGATGAAGATTTCCATCCAAAACTTTCTGATTTCGGGCTTGCAAAATTTGGTCCAACCGGAGATGAATCATATGTTGCCACTAGGGTCATGGGAACACAAGGTTACTGTGCCCCTGAATATGCCACTAGTGGAAAATTAACGAAGAGATCTGACATTTACAGTTTTGGGGTTGTGTTATTGGAACTAATTACTGGACGCAAAGCATACAATGATAACCGTGGCACTGAAAAGCATCTGGTAGACTGGGCACGTCCAATGTTCAGAGAGAAAAGGAGTTTCCCTAGATTGGTAGATGCACGGCTTCAAGGCAAGTACCCAGGATCTTCTCTAACGATGGTCATTGAATTGACAGCCATGTGTCTTCGTGAAGAGCCACATCAACGGCCTAATGCAGGTGATATAGTGGAAGCTCTGGAGTTCTTGTCATCCAAGCAATATTCCCCAAAAGTGTTGAACACAGTCAACAACACAGCTGAGATGGAGAGTGGAGAGTCCTCAAATGAAACGACTGCGATTTTGCCTAAAGAATCAGTAAGAGAGCGAGCTGTTGCAGAAGCCAAGCTGTGGGGGGAAACATGGAGGCAGAGACGACAAAGTCAGCAAAGCAGTCCTAAAGAAGCATATAGGTTGTGA 1260 0.4405 MGSCHCFGLRKKSKGKSANARDEENKNRKSVERINDVSASFSGNGPEENPKEEGESPHEARIFTFRELATATKNFRDETFIGQGGFGIVYKGMIGENQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHSNLVNMIGYCAEGDQRLLVYEYMALGSLESHLHDVSPDEEPLDWNTRMMIACGSAKGLHYLHDEAKPSVIYRDLKTSNILLDEDFHPKLSDFGLAKFGPTGDESYVATRVMGTQGYCAPEYATSGKLTKRSDIYSFGVVLLELITGRKAYNDNRGTEKHLVDWARPMFREKRSFPRLVDARLQGKYPGSSLTMVIELTAMCLREEPHQRPNAGDIVEALEFLSSKQYSPKVLNTVNNTAEMESGESSNETTAILPKESVRERAVAEAKLWGETWRQRRQSQQSSPKEAYRL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01012 419 FunFam probable serine/threonine-protein kinase RLCKVII 47 150 - -
Phco2g01012 419 PANTHER OS07G0668900 PROTEIN 24 358 - -
Phco2g01012 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Phco2g01012 419 MobiDBLite consensus disorder prediction 1 58 - -
Phco2g01012 419 CDD STKc_IRAK 81 348 - -
Phco2g01012 419 SMART serkin_6 75 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01012 419 MobiDBLite consensus disorder prediction 367 386 - -
Phco2g01012 419 Pfam Protein kinase domain 76 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01012 419 SUPERFAMILY Protein kinase-like (PK-like) 55 350 IPR011009 -
Phco2g01012 419 FunFam Serine/threonine-protein kinase PBS1 151 366 - -
Phco2g01012 419 ProSiteProfiles Protein kinase domain profile. 75 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g01012 419 Gene3D Transferase(Phosphotransferase) domain 1 151 373 - -
Phco2g01012 419 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Phco2g01012 419 MobiDBLite consensus disorder prediction 367 382 - -
Phco2g01012 419 MobiDBLite consensus disorder prediction 15 33 - -
Phco2g01012 419 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01012 Phco-Chr2 13511036 13515969 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco2g01012 Pkinase 5.1e-49 CL0016