Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00994 ATGATCAATTCACTCTGTGGAACTCTCAAGAGTGAGAACAACTCTAAAACCAAACTCCAACCCACATCTTCAAATGACTCAGTTTTGCAATCCAAGAAAAATGCCACTCAATCCTCTGGTGATCTTGACCAAACTACCCTAACCCCACCAAGCTTAAACCTTCCTGCACTCAAATTTGAGTTGGATGGAGATGTGGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCCTTTTTTGCTGACCAATTAGATGCTGATTTCATGATATCTTCTCCAGTGAGGAACGTCCCCTCCCCTCAAGTCTCTTCCTACAATTGCAACTATAACTATGCTCATGGAATGCAAAGCCAGAGTCTCTCGGGGTGTTCCCCACCAAGGTTTTCGTCATCCCAGATTGGAGCCTTCAACAGCAGCCACAAAGGGAAAGGACTTAGCCCTCTCCACAGGGTCTTCAACTCGCCAAACAATCAGTACATGCAGCATGTTGAAAACCTTTCCCTTCCAGCAATAGAAGAGTTCTTGGAGGACTATCAAGGGTATTCATCAACCAAGGTGTCTTCTGAAATTGCAACTTCATCTGAATGCTTTGACTTGTCTACTCAAATCCCACCATCCTTATTGGATAGCTTGACACTGCCCAATTCCTCAAGGTACCATGGTTCAGTCGATGAAGAATCCTCAGTGCACGGTGCTGGCTCTTCTCAACTGTCCCAAGAGAGTGACATCTATCATCAGATGGGGTCCATGGCTAGTGCATCCCTCTCACAGGCTCTACAACAAGAACGCTACCAAGAGAAACGGCAAAAGCGGCAAGCACAACAACTTCACCAACAACAACAACAGCGCCAGCAAGACAATCTCATGGTGCCCATTCCAATCGGAATGGAGCAGGAGCAAGACAGCGGACTTCAACTGGTGCACCTGCTTCTGGCCTGCGCAGAGGCAGTGGGGAAAGAGGAATACATGCTAGCAAGAAGGTACCTCCACCACCTCAACCGTGTCGTCACTCCCTTAGGCGACTCCATGCAGCGCGTGGCCGCGTGCTTCACCGACTCGCTCAGCGCCAGGCTCAATGCCACCCTCACACCGAAACCCTCCAAACCCCTCAGCCCCTCAAACTCCATGGAAGTCCTCAAAATCTACCAGATCGTGTACCAGGCCTGCCCCTACGTCAAGTTCGCCCACTTCACCGCCAACCAGGCCATCTTCGAAGCCTTCGAAACCGAAGAGCGTGTCCACGTCATCGACCTCGACATCCTCCAGGGCTACCAGTGGCCCGCCTTCATGCAGGCCCTCGCCGCCCGCCCCACCGCCGCTCCCTTCCTTCGCATTACCGGCGTTGGCCCCTCTCTTGATGCCGTCCGCGAAACCGGCCGCTGCCTTAACGAGCTCGCCCACTCCCTGCGCATCCCCTTCGAATTCCACGCCGTCGGAGAACAGCTCGAGGATCTCAAACCCCACATGCTGCACCGCCGTGTCGGGGAGGCCCTCGCGGTTAACGCAGTGAACCGTCTCCACCGCGTCCCCGGGAATCACCTCGGGAACCTTCTCGCCATGATACGCGACCAGGCACCGAACATAGTGACCCTGGTGGAGCAAGAGGCAAGCCACAACGGACCCTACTTTCTGGGGCGGTTTCTCGAGGCGTTGCACTACTACTCGGCGATCTTCGACTCGTTGGACGCAACGTTTCCGGCAGATTCGGCTCAGCGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATACGGAACATTGTGGCGTGCGAGGGGGCGGAGAGGTTTGAGCGGCACGAGAGGCTGGAGAAGTGGCGGAAGATAATGGAGGGGAAGGGGTTCAAGGGCGTGGCGCTGAGCCCGAACGCGGTGACTCAGTCGAAGATTTTGCTTGGGTTGTACTCGTGTGATGGGTATAGGTTGACGGATGATAAGGGCTGCTTACTTCTTGGGTGGCAGGATAGGGCCATCGTTGCTGCGTCTGCATGGCGGTGTTGA 1995 0.5419 MINSLCGTLKSENNSKTKLQPTSSNDSVLQSKKNATQSSGDLDQTTLTPPSLNLPALKFELDGDVEVQSPDSSMWESFFADQLDADFMISSPVRNVPSPQVSSYNCNYNYAHGMQSQSLSGCSPPRFSSSQIGAFNSSHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGYSSTKVSSEIATSSECFDLSTQIPPSLLDSLTLPNSSRYHGSVDEESSVHGAGSSQLSQESDIYHQMGSMASASLSQALQQERYQEKRQKRQAQQLHQQQQQRQQDNLMVPIPIGMEQEQDSGLQLVHLLLACAEAVGKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNATLTPKPSKPLSPSNSMEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPTAAPFLRITGVGPSLDAVRETGRCLNELAHSLRIPFEFHAVGEQLEDLKPHMLHRRVGEALAVNAVNRLHRVPGNHLGNLLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSAQRAKVEQYIFAPEIRNIVACEGAERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCDGYRLTDDKGCLLLGWQDRAIVAASAWRC 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00994 664 Coils Coil 258 278 - -
Phco2g00994 664 ProSiteProfiles GRAS family profile. 296 663 IPR005202 -
Phco2g00994 664 MobiDBLite consensus disorder prediction 254 285 - -
Phco2g00994 664 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 257 658 IPR005202 -
Phco2g00994 664 MobiDBLite consensus disorder prediction 10 49 - -
Phco2g00994 664 Pfam GRAS domain family 305 663 IPR005202 -
Phco2g00994 664 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00994 Phco-Chr2 13067664 13069758 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco2g00994 GRAS 4.1e-130 CL0063