Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g00985 | ATGAGAGGTGGAGCAGCAACATTTGATTTGGCAATAGGGCTAAGCAAGGCTGTGATCTCAGCCTCAAAAAAGAGGGGAAGGCAATGTTTGTGGGGTTCTCAAGTGGAGGAGACACTCCACAGGTTGGGTTGGCGCCAATGCCTGACTCCATCATTGGTGGCCAATGTGATTGACCCTTTCCTCCTCACTCACTATTCTCTTGCTCTTGGCTTCTTCAATTGGGCCTCTCAGCAGCCTGGCTTTGTCCACACACCCTTCACCTACCACTCACTCCTCAAATCCCTCTCACACACCAACCACTTCACTGCCATTCATTCACTCCTCAAACAAGCCAAAGCCCTCAACTTTTCCATCCACCCTTCTCTTTTCAGCTCCATCATAGCATCCCATGTTTCCCACAACCGTGCTCGTGAAGCCTTTTGGCTCTTGGGCAGTGTTGCTCCCCTTTGTGCCGAAATTGGAGGGCCCACGTGTAACTCGCTCTTGGCGGCCCTTGCCTCTGATGGGTGCTTGGAAGATGCCTGCAAACTGTTTGATGAAATGACTGAGAAGGGTATTGGTTTCAGCACGCTGGGATTTGGGGTGTTTATTTGGCGGGTTTGTGGAGAGGGTGATTTGGAGAGGGTTGTGAGCTTGTTGGACGAGGTTAAGGAACATGGTTCTGGGATTAATGGTTCTGTTGTGGCGCTATTGATTGTTCATGGCTTGTGTCGGGCTTCTAAGGTATCAGAGGCTTTGTGGATGTTGGATGAACTCAGGAGTAGGGGTTGGAAACCTGATTTCATGGCTTACTGGGTTGTTGCGGCAGTGTTCCGGACTATGGGAAATGTAGCTGATGAGGTGAAGGTTTTGAAGAAGAAGAGGAAGTTAGGGGTGGCTCCTCGAAGCAGTGATTATAGGGACTTGATACTTGGCTTGGTTAGGGAGAAGCGTATCTATGAAGCAAAAGACGTTGGGGAGGTTATAGTTGGTGGTAATTTTCCTGTTGATGATGATGTTCTCAATGCATTGATAGGATCTGTATCAAGTGTTGATTCTAGTGCAGCCACTGTGTTTCTCAATTTCATGGTTGAGAAAGAGAGGTTCCCAACTATTTTGGCCGTCAGCGATTTGAGTAGGAATCTGTGTAGGCATGGCAAAGTTGATGGATTATTGGAGATGTTCCATGTTTTGAATTCTCAAAACTACTTTAAAGATGTGGAGGGTTTCAATGTAATGATGTCATTTTTGTGCAAAGCTGGAAAAGTGAGAGAAGGCTATACTGTTCTGCAGGAGATGAAGAAGAAAGGGTTCCAGCCCAATGTCTCATCTTATAATTACATTATGGAAGCATGTTGTAAGGAGGATCTACTGCTCCCTGCAAGGAAGCTCTGGGATGAGATGTTTTCGAATGGCTGTTGCGGGAACTTGAAAACATACAACATTCTTATACAAAAATTCTCTGAAGTGGGACAAGCTGAAGAGGCTCAAATGCTCTTCTACCACATGTTAGACAAAGGGGTGGAACCTGATGTTACAAGTTATATTTTTCTTCTTGAAGGACTCTGCCAGGAAGACAAGCTAGAAGCAGCTTTTGAGCTCTATAACAGGTCTGTCAAACAGGACATAGTCCATGCAAGAGACATATTGAGCTCGTTTACATTATCACTATGCAAGAAAGGACATCTTATGGCTGCATCTAAATTACTTTGCAGTCTCAATCATGATATAGGATGTGCAGGATCCCATATAATTTTGTTGAAAAGTTTGTCAGATGCACAAGAGATTCCAATTGCCATTGAGCACTTGAAGTGGGTTCAGGAAAAATCACCTTTGATACTAAAAGATATATGTACTGCACTTTTGGATTCTCTTTCTTCTGCTACACGCCCAAAGCCAATGTTACAGTTCCTTCAAAGAATACAAAATGTGTTTGATTTCCCGTACTTTGAAGGATATGTGTGA | 1944 | 0.445 | MRGGAATFDLAIGLSKAVISASKKRGRQCLWGSQVEETLHRLGWRQCLTPSLVANVIDPFLLTHYSLALGFFNWASQQPGFVHTPFTYHSLLKSLSHTNHFTAIHSLLKQAKALNFSIHPSLFSSIIASHVSHNRAREAFWLLGSVAPLCAEIGGPTCNSLLAALASDGCLEDACKLFDEMTEKGIGFSTLGFGVFIWRVCGEGDLERVVSLLDEVKEHGSGINGSVVALLIVHGLCRASKVSEALWMLDELRSRGWKPDFMAYWVVAAVFRTMGNVADEVKVLKKKRKLGVAPRSSDYRDLILGLVREKRIYEAKDVGEVIVGGNFPVDDDVLNALIGSVSSVDSSAATVFLNFMVEKERFPTILAVSDLSRNLCRHGKVDGLLEMFHVLNSQNYFKDVEGFNVMMSFLCKAGKVREGYTVLQEMKKKGFQPNVSSYNYIMEACCKEDLLLPARKLWDEMFSNGCCGNLKTYNILIQKFSEVGQAEEAQMLFYHMLDKGVEPDVTSYIFLLEGLCQEDKLEAAFELYNRSVKQDIVHARDILSSFTLSLCKKGHLMAASKLLCSLNHDIGCAGSHIILLKSLSDAQEIPIAIEHLKWVQEKSPLILKDICTALLDSLSSATRPKPMLQFLQRIQNVFDFPYFEGYV | 647 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g00985 | 647 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 399 | 433 | IPR002885 | - | |
| Phco2g00985 | 647 | Gene3D | Tetratricopeptide repeat domain | 60 | 147 | IPR011990 | GO:0005515 | |
| Phco2g00985 | 647 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 469 | 503 | IPR002885 | - | |
| Phco2g00985 | 647 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 434 | 468 | IPR002885 | - | |
| Phco2g00985 | 647 | Gene3D | Tetratricopeptide repeat domain | 233 | 350 | IPR011990 | GO:0005515 | |
| Phco2g00985 | 647 | Pfam | PPR repeat | 232 | 256 | IPR002885 | - | |
| Phco2g00985 | 647 | Pfam | PPR repeat | 157 | 186 | IPR002885 | - | |
| Phco2g00985 | 647 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 225 | 259 | IPR002885 | - | |
| Phco2g00985 | 647 | Gene3D | Tetratricopeptide repeat domain | 373 | 576 | IPR011990 | GO:0005515 | |
| Phco2g00985 | 647 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 154 | 188 | IPR002885 | - | |
| Phco2g00985 | 647 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 504 | 538 | IPR002885 | - | |
| Phco2g00985 | 647 | NCBIfam | pentatricopeptide repeat | 472 | 505 | IPR002885 | - | |
| Phco2g00985 | 647 | NCBIfam | pentatricopeptide repeat | 232 | 260 | IPR002885 | - | |
| Phco2g00985 | 647 | NCBIfam | pentatricopeptide repeat | 437 | 469 | IPR002885 | - | |
| Phco2g00985 | 647 | NCBIfam | pentatricopeptide repeat | 157 | 186 | IPR002885 | - | |
| Phco2g00985 | 647 | NCBIfam | pentatricopeptide repeat | 403 | 435 | IPR002885 | - | |
| Phco2g00985 | 647 | Pfam | PPR repeat family | 398 | 447 | IPR002885 | - | |
| Phco2g00985 | 647 | Pfam | PPR repeat family | 471 | 517 | IPR002885 | - | |
| Phco2g00985 | 647 | Gene3D | Tetratricopeptide repeat domain | 155 | 232 | IPR011990 | GO:0005515 | |
| Phco2g00985 | 647 | PANTHER | MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE | 346 | 632 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g00985 | Phco-Chr2 | 12829507 | 12831555 | Dispersed |