Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00970 ATGGAGAATTATACCATGTTGTTCCCTTGTCCCAATTCATCCAGCTACCCCATTTCAACCACTGGTGTGGGAACCTCTCAGCATGGTTTTGGGGGTCAAAGCTCCAATGCATTCCTAGGTCTAAGGCCTAGTAATGAGAGTAGTGGTAGTGATCATGAAAAGAGAGGAGAAGGTGGTAGAGATGGTACCATGTTAATGTCTCAGATCAGTGGTGGCATTAATGGGAGTGATGAGTTGGGTGGTTTGGGAAATGATAGTAGTAATAATAACAAAAAGAAAGGGGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTCCAAACTAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGGTGGAGGAAGTATGGCCAAAAAGCTGTCAAAAACAACAAGTTTCCAAGGAGTTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTCCAACGCCTAACCAAAGACGAAGGGGTAGTGGTGACTACTTACGAGGGAGTCCACACTCACCCAATTGAGAAGACAACAGATAACTTCGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 582 0.4364 MENYTMLFPCPNSSSYPISTTGVGTSQHGFGGQSSNAFLGLRPSNESSGSDHEKRGEGGRDGTMLMSQISGGINGSDELGGLGNDSSNNNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00970 193 MobiDBLite consensus disorder prediction 67 88 - -
Phco2g00970 193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 176 IPR044810 GO:0003700
Phco2g00970 193 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00970 193 MobiDBLite consensus disorder prediction 22 46 - -
Phco2g00970 193 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00970 193 Gene3D WRKY domain 99 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g00970 193 FunFam WRKY transcription factor 57 100 174 - -
Phco2g00970 193 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g00970 193 MobiDBLite consensus disorder prediction 22 100 - -
Phco2g00970 193 SUPERFAMILY WRKY DNA-binding domain 106 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00970 Phco-Chr2 12460569 12462219 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco2g00970 WRKY 1.8e-26 CL0274