Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00965 ATGGCAGACCCAACAGCCATGTATGAGTTCCTCAAGCAGCCCTCAAACGCTGGTGTAAAGAGACCACTACCACCACCCTCCACCACCACCAACACCGCAGCCACCACACGCACCTTCCAATGCCACTTCTGCCACCGCAAGTTCTACACATCGCAAGCCCTCGGCGGCCACCAAAACGCCCACAAGCTGGAGCGAGCCGCCGCGAGGAGACAAACCAACGGGCTTCTCCCGCCGCCCCCGCTGCCGCTGGAGCCTACTCTCAAGCCAACCGAACCCAGGCCCAGGCCCACGCTGGAGCCACTGGAGCCCACCTCCGGGCTCTTCTTCCACCCTCCCTACTGGCTCGATATGGAGCCCCTGCAGTTCCAAAGCACCCACCCTTACGTGACCGCCGCCACCCTTCCCGTTCCGTTCCACGCCGCGTCTTCCACCGTACCCCAACAACAACAAGTCCTTTCCCACAATGTTGACGCTTCCGACCACGTCAACATCGACCTCACTCTCCGCTTGTGA 513 0.6179 MADPTAMYEFLKQPSNAGVKRPLPPPSTTTNTAATTRTFQCHFCHRKFYTSQALGGHQNAHKLERAAARRQTNGLLPPPPLPLEPTLKPTEPRPRPTLEPLEPTSGLFFHPPYWLDMEPLQFQSTHPYVTAATLPVPFHAASSTVPQQQQVLSHNVDASDHVNIDLTLRL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00965 170 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Phco2g00965 170 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 27 73 IPR044246 GO:0009788
Phco2g00965 170 MobiDBLite consensus disorder prediction 72 100 - -
Phco2g00965 170 MobiDBLite consensus disorder prediction 12 32 - -
Phco2g00965 170 MobiDBLite consensus disorder prediction 75 99 - -
Phco2g00965 170 Gene3D Classic Zinc Finger 25 75 - -
Phco2g00965 170 SUPERFAMILY beta-beta-alpha zinc fingers 36 66 IPR036236 -
Phco2g00965 170 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00965 Phco-Chr2 12350242 12350754 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g00965 None None None