Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00951 ATGATGATGGATCAGCGACAGCGAGAGAAACTGCTTCACAAAACCGAGGCCTGTGCTTTCGTGGCAGGTGTTGATGCCGAGCTTCGACTTGTCGCCGCCCCAGGGGACATCACCAACACCAACAACGTTAACAAGATCATCAACAGCAGCAGCAGCAACGTATCTCAATCTCACGGGTCGGGTCGGATCCACGACACCAACCACCTTGGTCTCGTCGCTGCGGTTACCAACCTCGGAACTGTTAACAGGAAGAAGAGGATGCCCAGGCAGCGAAGATCCACCACCTCCACCTCCACCACCAACCCCACCTTGTTTATGCAGATGCACCACTTCGACAACCCTTTCTCCTCTAAGCATCACCAGCCTAATTTACCATCTTCAACTCCCTCCGCGTCCTCGCACGTGCCACCCTCCTCTCTCCAGTCTGTTAAACCCTCCACTCCTCCCCCGTCCGCACGTGAAATCGATCATAGAAACCTGAGGTTCCTTTTCAAAAAGGAGTTGAAGAACAGTGATGTTAGTTCCCTAAGGAGAATGATATTGCCAAAGAAAGCAGCAGAAACTTTCCTTCCAGCACTGGATTCAAAAGAAGGAATTTTGATGAACATGGATGATAAAGATGGTACTCATGTGTGGAGTTTCAAGTACAGGTTTTGGCCAAACAACAACAGTAGGATGTACGTACTTGAAAATACCGGGGAATTTGTCAGCACACATGGCCTTCGATTTGGGGATACCATTGTGGTTTACCAACATATTGAAAACAATAACTATGTTATTCAGGCTAGAAAAGGTGGTTGGGAGGAGGATGAATTTATGGAACAAAATAGTGAGACAGTGAACGACATGTTCCTGAGTGACTTGGAGGTGAACAAACCTGGTTGTTTCAATATAACCTATCCTGCAGTGAATGATACTGGCATGTCCTTCATATATGACACTACTTTCTCAAATGACTCCCCACTTGACTTTTTGGGTGGATCAATGACTAATCTTTCAAGGATTGGACCAGTTGAAACCTTTGGTTCTGTTGAGAATTTGTCCCTTGATGACTTCTATTAA 1062 0.4633 MMMDQRQREKLLHKTEACAFVAGVDAELRLVAAPGDITNTNNVNKIINSSSSNVSQSHGSGRIHDTNHLGLVAAVTNLGTVNRKKRMPRQRRSTTSTSTTNPTLFMQMHHFDNPFSSKHHQPNLPSSTPSASSHVPPSSLQSVKPSTPPPSAREIDHRNLRFLFKKELKNSDVSSLRRMILPKKAAETFLPALDSKEGILMNMDDKDGTHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRFGDTIVVYQHIENNNYVIQARKGGWEEDEFMEQNSETVNDMFLSDLEVNKPGCFNITYPAVNDTGMSFIYDTTFSNDSPLDFLGGSMTNLSRIGPVETFGSVENLSLDDFY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00951 353 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 82 267 IPR044800 GO:0003700
Phco2g00951 353 Pfam B3 DNA binding domain 164 264 IPR003340 GO:0003677
Phco2g00951 353 CDD B3_DNA 162 264 IPR003340 GO:0003677
Phco2g00951 353 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Phco2g00951 353 MobiDBLite consensus disorder prediction 92 107 - -
Phco2g00951 353 MobiDBLite consensus disorder prediction 117 148 - -
Phco2g00951 353 SUPERFAMILY DNA-binding pseudobarrel domain 162 266 IPR015300 -
Phco2g00951 353 Gene3D - 160 279 IPR015300 -
Phco2g00951 353 MobiDBLite consensus disorder prediction 79 154 - -
Phco2g00951 353 SMART B3_2 164 266 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00951 Phco-Chr2 12012826 12016000 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phco2g00951 B3 5.5e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00951 2 12012826 12016000 Phco2g00951 2 12012826 12016000 ECH