Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00943 ATGAGCAGTTGGAAAAACCTTCTTCTACGAATCGGTGACAAGAGTCCCGAATACGGAGTCTCCTCTGACTACAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGCCGCGAACTTGACCACTCCCAAACCGATGTTTTGGAGTTCATTCTTATGTGTGCTGAGCGTTTGTCCCACAAGATTCCTCTATATGGAACCCTGATTGGCTTAATTAACTTGGAAAATGAGGACTTTGGGAAACAACTAGTGGAGAAAACTCAAACTATATTTCAGGATGCCTTGGATACTGGAAACTGCAATGGGGTTCGTGTTCTAATGCGGCTTTTGACTGTTATGATGTGCAGTAAGGTTATTCAACCGAGCTCTTTGGTGGCTGTCTTTGAAACATTTTTATCCTCAGCTGCCACAACAGTAGATGAGGAAAAAGGCAATCCCTTATGGCAGTCATGTGCAGACTTTTACATAACTTGCATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTTTTGAGCAAGTTCCTGAAGATATCGAGAGAGTGATAGTAGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATGCATCTGATTCTGGTTTATCCTTTTTCGAGAATGATGATGAAAACGGGGAAGGTCTTAATGACAAGGATTTTTTGGAAGATTTATGGGATAGAATACAGGTTTTAGCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGGCCTCATCTTTCATTTGAAGCTCAGCTGGTAGCTGGGAAGTCTCATGAATTTGGGCCAATAAGCTGCCCCAGCCTACCAAAACCACCATCAGTCTCTTCAGGTGTCTTTACTGGTAAACAGAAGCATGAAGCAGAACTAAAATACCCTCAAAGGATTCACCGGTTAAACATATTTCCTCCCAGTAAACATGAGGATCTACAACCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTCAATGGCTGCCGAAAGGAATGCGCCTCTTTCATGGTTGGTCTGCCAGTTTCCTTCAGATATGAGTACCTCATGGCCGAGACAATATTTTCTCAGCTGCTGATGCTACCTCAACCACCTTTCAGACCAGTGTATTATACGCTTATTATTATTGACCTTTGCAAGGCTCTTCCTGGAGCTTTTCCTGCTGTTGTCGCTGGAGCAGTTCGTACTCTCTTTGAGAGGATAGCTGATTTGGATATGGAATGTCGAACACGTCTAATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATTTGGCCATGGGAAGAGTGGGCTTATGTCCTAGACCTCCCAAAGTGGGCACCACAACGTGTCTTTGTCCAAGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCGCCTCGTTTAGAAGAATTGCTTCCCCCAAAGAGCGGGCCGAACTTTAGTTTTGGTGCAGAAGATGGTAAAGAAAGCAATGAGCATGAGCTGTCTGGAAAGCTCAACAACATGGTTAAAGGGAAGTCACCTGTCCGGGAAATAATCTCTTGGATTGATGAAAGCGTGTTTCCAAATAATGGTCTAGAAGTTACCCTCAGAGTGATTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATAACTGTCTTGGAGAGATATGGGCAAGTCTTTGCAAAAGTATGTCCTGACGAGGATCGACAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATCGACTTGTATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCGGAAAATATTGAGCAATTTCATACATCGGATCGTCCATGGGAGATTCTTAGAAATGCCGTAAGCAAGACACACAATCGTATTTCTGATCTACGGAAAGAAATATTAACTATTAGAAAGAACATTTCATCAGCTGAAGAAGCTGCCAAGGAGGCAAAAGCAGAGCTAGATGCTGCAGAGTCGAAACTTACACTTGTTGATGGTGAACCAGTTCTTGGTGACAATCCTGTTAGATTGAATAGGTTGAAATCACATGCTGAAAAGACAAAGGAGGATGTAGTGACTCTTCAAGAATCTTTAGAATCTAAGGAAGCTCTTCTTGTCCGAGCAATTGAGGAAAATGAGGCATTGTTTCTCTTGTTGTACAAAAGCTTCTCAAATGTGTTGACAGAGCGCCTTCCTGAAGGAACTAGAACACTGCATGAGTTGAAGTCTGCACAAGTAGATGTGATGGCAGTGGACACTGAAGAGCCACCATCAATGGAATTAGATGACGAAAACCAGAGATCTCAAAACAGTCAGTCAAATGGAGAGAAGAAAGGTGGTGCTTATACTGTAGGGGAAAAGGAGCAATGGTGTATTACCACTTTGGGTTATGTGAAGGCTTTTTCTAGGCAATATGCTGCTGAGATATGGCCCCATGTTGAAAAGTTGGATGCAGAGGTATTGACAGAAGAAACACCTTTTCTTTTTAGGTCAGCTGTTTATACCGGTCTTCGTAGACCAATTAACGAGGCTTGA 2589 0.4264 MSSWKNLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDHSQTDVLEFILMCAERLSHKIPLYGTLIGLINLENEDFGKQLVEKTQTIFQDALDTGNCNGVRVLMRLLTVMMCSKVIQPSSLVAVFETFLSSAATTVDEEKGNPLWQSCADFYITCILSCLPWGGAELFEQVPEDIERVIVGVEAYLSIRKHASDSGLSFFENDDENGEGLNDKDFLEDLWDRIQVLASNGWKVESVPRPHLSFEAQLVAGKSHEFGPISCPSLPKPPSVSSGVFTGKQKHEAELKYPQRIHRLNIFPPSKHEDLQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFRPVYYTLIIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPRLEELLPPKSGPNFSFGAEDGKESNEHELSGKLNNMVKGKSPVREIISWIDESVFPNNGLEVTLRVIVQTLLNIGSKSFTHLITVLERYGQVFAKVCPDEDRQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILTIRKNISSAEEAAKEAKAELDAAESKLTLVDGEPVLGDNPVRLNRLKSHAEKTKEDVVTLQESLESKEALLVRAIEENEALFLLLYKSFSNVLTERLPEGTRTLHELKSAQVDVMAVDTEEPPSMELDDENQRSQNSQSNGEKKGGAYTVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEETPFLFRSAVYTGLRRPINEA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00943 862 Coils Coil 695 729 - -
Phco2g00943 862 FunFam Nuclear cap-binding protein subunit 1 3 269 - -
Phco2g00943 862 Gene3D - 3 269 - -
Phco2g00943 862 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Phco2g00943 862 FunFam Nuclear cap-binding protein 296 481 - -
Phco2g00943 862 Gene3D - 490 847 - -
Phco2g00943 862 MobiDBLite consensus disorder prediction 781 796 - -
Phco2g00943 862 PANTHER CAP BINDING PROTEIN 3 843 IPR027159 GO:0000339|GO:0005846|GO:0006406
Phco2g00943 862 Coils Coil 644 685 - -
Phco2g00943 862 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Phco2g00943 862 SUPERFAMILY ARM repeat 478 844 IPR016024 -
Phco2g00943 862 Pfam MIF4G domain 21 196 IPR003890 GO:0003723|GO:0005515
Phco2g00943 862 SMART if4_15 8 229 IPR003890 GO:0003723|GO:0005515
Phco2g00943 862 Gene3D - 298 481 - -
Phco2g00943 862 Pfam MIF4G like 498 826 IPR015174 GO:0016070
Phco2g00943 862 MobiDBLite consensus disorder prediction 774 799 - -
Phco2g00943 862 Pfam MIF4G like 343 467 IPR015172 GO:0016070