Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00941 ATGAAAGACGCAGACGCAATGCAAGTAAGGTTTAGTCCTTGTTTTCTCCTCAGCTCTTTGTTCTCTGCAATTAGCATGCCTTCCTTCCTCCTCAGTTTAATGCCGAACCCTTCATCACCCATTATGAAATTCCTTAAAATCTTCAAATCCAAACACGTCAATCTCCGAACTTTCAATTCCCTCTCCCAACCCACCACCGTCCCACCAATCACCGAATCTCAACTCCTAAATTCCATCAAATCTTCTAACTGGCATTTCATCAAACAGGCTGCCCCACACTACACTCCCTCTATTCTCTCTTCCACTCTAACCTCCCTCCGCAACAACCCTCAACTCGTCCTTCAGCTTCTCTCCCATCTCAACACCCACCCTCATTCCCTCGACTTAACCACCTCTTCCCTCGCTGCTTGCATCCTCTGTCGCCTCCCATCTCCCAAACCCTCTATTAACCTCTTACAGCGCCTCATTCTATCTTCCACTCTCACCAACAGAACAATTTTCCATGAGTTGGCACTGTCCCGCGATCGCGTGGATGCCAAGAGTACTCTCATCTTTGACCTTCTGGTCAGGGCCTATTGTGAACTCAAGAAGCCCAATGAGACCTTGGAGTGTTTCTACTTGATGAAGGAAAAGGATGTTGAGCCCAACATTGAGACTTGCAATCAGATGTTGAGTCTGTTTTTGAAACTCAACAGGACTCAGATGGCTTGGGTTTTGTATGCTGAGATGTTTAAGATGAATATAAGATCTAGTGTATACACTTTTAACATCATGGTTAATGTGTTGTGTAAAGAAGGTAAGTTGAAGAGGGCAAATGAGTTTGTTGGGCACATGGAGGCTCTTGGGGTGAGGCCTAATGTTGTCACCTATAACACTGTTATACATGGACACTGTTTGAGAGGGAAGTTCCAGAGGGCCCGTCTGATCTTTCAAACAATGAAAGATAAAGGTCTTGAGCCTGATTGCTATACATATAATTCTTTCATATCTGGGCTGTGTAAAGAAAGAAGACTTGAGGAGGCATCTGGTTTACTTTGTAAAATGTTAGAAATTGGCTTGGTTCCAAATGCAGTAACATATAATGCTTTGATTGATGGGTATTGCAACAAAGGGGATCTGGATAAGGCTTTTGCCTACAGGGATGAGATGATAAATAAAGGTGTAACTACATCTCTGGTTACCTACAATTTGTTTATCCATGCACTGTTTATGGAAGGAAGGATGGGGGAGGCTGATAATATGATAAAAGAAATGCAAGAAAAAGGCATGAAGCCTGATGCTGTTACGTATAACATATTGATTAATGGTTATTGCAGATGCGGTGATGCAAAGAGAGCCTTCAGCCTTCTTGATGAAATGGTGGGAAAAGGAATTCAGCCAACTTTGGTCACATATACATCACTTATATATGTTCTGGGTAAAAGGAATAGAATGAAAGAAGCAGATGCCTTGTTTATTAAGATCCAACAAGAAGGTCTATTGCTAGATACTGTAATGTTTAACGCGTTGATCGATGGTCACTGTGCAAATGGCAATATTGCTCGTGCATTTCAGCTCTTGAAACAGATGGGTAACATGAAGGTTCCTCCTGATGAAATCACTTATAACACCTTGATGCAAGGATACTGCAGAGAGGGGAAAGTGGAGGAAGCTAGGCAACTTCTTGATGAGATGAAGAGAAGGGGGATCAAACCTGATCACATTAGTTACAACACACTCATTAGCGGTTACAGTAAAAGAGGTGATATGAAGGATGCTTTTAGAGTTCGCGATGAAATGATGACTACAGGATTTGATCCTACAATTCTCACTTACAATGCTCTTATACAAGGTTTGTGCAAAAATCGAGAAGGTGAGCATGCTGAAGAGCTCCTCAAAGAAATGGTAAATAAAGGCATTACTCCTGACGACACTACCTACCTATCTATAATTGAGGCGATGGAGAAAGTTGATGATGATCTGGAGGAAAATGATGATAAATGA 1983 0.4196 MKDADAMQVRFSPCFLLSSLFSAISMPSFLLSLMPNPSSPIMKFLKIFKSKHVNLRTFNSLSQPTTVPPITESQLLNSIKSSNWHFIKQAAPHYTPSILSSTLTSLRNNPQLVLQLLSHLNTHPHSLDLTTSSLAACILCRLPSPKPSINLLQRLILSSTLTNRTIFHELALSRDRVDAKSTLIFDLLVRAYCELKKPNETLECFYLMKEKDVEPNIETCNQMLSLFLKLNRTQMAWVLYAEMFKMNIRSSVYTFNIMVNVLCKEGKLKRANEFVGHMEALGVRPNVVTYNTVIHGHCLRGKFQRARLIFQTMKDKGLEPDCYTYNSFISGLCKERRLEEASGLLCKMLEIGLVPNAVTYNALIDGYCNKGDLDKAFAYRDEMINKGVTTSLVTYNLFIHALFMEGRMGEADNMIKEMQEKGMKPDAVTYNILINGYCRCGDAKRAFSLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFIKIQQEGLLLDTVMFNALIDGHCANGNIARAFQLLKQMGNMKVPPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNREGEHAEELLKEMVNKGITPDDTTYLSIIEAMEKVDDDLEENDDK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 321 355 IPR002885 -
Phco2g00941 660 Gene3D Tetratricopeptide repeat domain 266 383 IPR011990 GO:0005515
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 216 250 IPR002885 -
Phco2g00941 660 Pfam PPR repeat 187 213 IPR002885 -
Phco2g00941 660 Coils Coil 643 660 - -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 286 320 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 358 388 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 428 461 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 568 601 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 288 322 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 533 566 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 185 217 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 604 636 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 323 357 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 463 496 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 498 532 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 253 287 IPR002885 -
Phco2g00941 660 NCBIfam pentatricopeptide repeat 393 427 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 391 425 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 601 635 IPR002885 -
Phco2g00941 660 FunFam Pentatricopeptide repeat-containing protein At5g39710 515 620 - -
Phco2g00941 660 SUPERFAMILY HCP-like 431 634 - -
Phco2g00941 660 Pfam PPR repeat 492 523 IPR002885 -
Phco2g00941 660 Pfam PPR repeat family 530 570 IPR002885 -
Phco2g00941 660 Pfam PPR repeat family 285 334 IPR002885 -
Phco2g00941 660 Pfam PPR repeat family 355 402 IPR002885 -
Phco2g00941 660 Pfam PPR repeat family 215 264 IPR002885 -
Phco2g00941 660 Pfam PPR repeat family 600 647 IPR002885 -
Phco2g00941 660 Pfam PPR repeat family 425 471 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 566 600 IPR002885 -
Phco2g00941 660 Gene3D Tetratricopeptide repeat domain 456 545 IPR011990 GO:0005515
Phco2g00941 660 Gene3D Tetratricopeptide repeat domain 546 658 IPR011990 GO:0005515
Phco2g00941 660 Gene3D Tetratricopeptide repeat domain 164 265 IPR011990 GO:0005515
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 251 285 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 181 215 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 426 460 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Phco2g00941 660 PANTHER ATPASE EXPRESSION PROTEIN 3 71 593 - -
Phco2g00941 660 SUPERFAMILY HCP-like 294 488 - -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
Phco2g00941 660 Gene3D Tetratricopeptide repeat domain 384 455 IPR011990 GO:0005515
Phco2g00941 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 530 IPR002885 -