LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco2g00913	ATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATACTTATATGGTTTTGTTTGTCTCGCCAGAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCACAAGTGGGAAGACATGGTGCAATTGAGTTGCCTAGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCTAGCCACAAAAAGTTTCAGCGACAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGTGGACTTGCTAGTCAGGAATTTGTGGATGAGGTACGTTATCTCTCATCTATTCACCACCGGAATCTCGTCAGTCTTTTAGGCTACTGCCAGGAGAACAGTCTTCAGTTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTGGTCAACAATCTCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTCTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACAGCTAATGTTCTTGTGGATGAAAACTTCATTTCTAAGGTGGCAGATGCTGGACTCCGCAATTTTTTGGGGAGAATTGACATTGCGGGCTCCTCTTCTCAAGCGGCAACAGATGAAATATTCCTTGCATCAGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGCATACAGCTTTGGCGTATTTTTGCTGGAATTGTTAAGTGGGAAAGAAGCAACAGGGTCACCATTTCCGGACTCTAATCAGAATCTGGTTGAATGGGTGCTAAGCAATGAAGACCGTGGCATGATGTCTTACACCATTGATCGGAGATTGGAGAGTAGTTGTACACCTGAAGGAATGGAAGATTACATCATGCTCATGATCAGATGCATAGACCCTTCAAGTGAGAGAAGACCTGCCATGAGCTATGTGGAAATGGAACTTGGTAGGATCCTAGAGAAGGAAATGAACCTGACAACAATCATGGGAGAAGGAACCCCAACTGTGACTCTTGGAAGCCAGTTATTCAAATCAACAACATGA	1134	0.4392	MSSTLAAIFGGAAGAVALVGIAILIWFCLSRQRNVSRTSETGSSDPSQVGRHGAIELPRDTRRFEMEELSLATKSFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSSIHHRNLVSLLGYCQENSLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFISKVADAGLRNFLGRIDIAGSSSQAATDEIFLASEVREFRRFSEKSDAYSFGVFLLELLSGKEATGSPFPDSNQNLVEWVLSNEDRGMMSYTIDRRLESSCTPEGMEDYIMLMIRCIDPSSERRPAMSYVEMELGRILEKEMNLTTIMGEGTPTVTLGSQLFKSTT	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco2g00913	377	Gene3D	Phosphorylase Kinase; domain 1	42	148	-	-
	Phco2g00913	377	Gene3D	Transferase(Phosphotransferase) domain 1	149	362	-	-
	Phco2g00913	377	FunFam	Protein kinase superfamily protein	149	362	-	-
	Phco2g00913	377	Pfam	Protein tyrosine and serine/threonine kinase	80	344	IPR001245	GO:0004672\|GO:0006468
	Phco2g00913	377	ProSitePatterns	Protein kinases ATP-binding region signature.	82	105	IPR017441	GO:0005524
	Phco2g00913	377	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	13	354	IPR047117	-
	Phco2g00913	377	ProSiteProfiles	Protein kinase domain profile.	76	349	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phco2g00913	377	FunFam	Protein kinase superfamily protein	42	148	-	-
	Phco2g00913	377	SUPERFAMILY	Protein kinase-like (PK-like)	56	342	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco2g00913	Phco-Chr2	11296377	11299107	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXa	Phco2g00913		PK_Tyr_Ser-Thr	6.3e-41	CL0016