Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00872 ATGGCTGACCAAGGATTGGAAGGGATCCAGCCAGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCCACCCTTCAAAATATTGTGTCCACAGTCAATTTGGACTGCAAGTTGGACCTCAAAACAATTGCACTACAAGCTCGTAATGCTGAGTACAATCCCAAGCGTTTTGCTGCTGTTATTATGAGGATAAGAGAGCCCAAAACAACTGCACTTATTTTTGCTTCTGGCAAGATGGTTTGTACTGGAGCTAAGAGTGAACAACAGTCTAAATTGGCGGCCAGGAAGTATGCTCGCATTATCCAAAAGCTTGGTTTCCCTGCCAAATTTAAGGATTTCAAAATTCAGAACATTGTTGGCTCTTGTGATGTCAGGTTCCCCATACGGCTGGAGGGTCTTGCATATTCTCATGGTGCTTTCTCAAGTTATGAACCAGAGCTGTTTCCAGGTTTAATCTACCGTATGAAGCAGCCTAAAATAGTCTTGCTTATATTTGTCTCTGGAAAAATTGTCCTAACAGGAGCAAAGGTGAGAGAAGAGACATATACTGCCTTTGAGAACATATATCCTGTACTTACTGAATTCAGGAAAAACCAACAATGGTTTCGTAAGATTTGTCTAGAAAGAGCAGGAGCAGCGGGTCTTGCAGAGAAGTTCGTGGAACTGTAA 669 0.429 MADQGLEGIQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVRFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKNQQWFRKICLERAGAAGLAEKFVEL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00872 222 ProSitePatterns Transcription factor TFIID repeat signature. 143 192 IPR030491 -
Phco2g00872 222 PANTHER TATA-BOX BINDING PROTEIN 3 200 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 Pfam Transcription factor TFIID (or TATA-binding protein, TBP) 112 195 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 Pfam Transcription factor TFIID (or TATA-binding protein, TBP) 23 104 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 CDD TBP_eukaryotes 22 195 IPR033710 GO:0003677|GO:0006352
Phco2g00872 222 PRINTS Transcription initiation factor TFIID signature 49 68 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 PRINTS Transcription initiation factor TFIID signature 139 154 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 PRINTS Transcription initiation factor TFIID signature 115 131 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 PRINTS Transcription initiation factor TFIID signature 25 40 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 PRINTS Transcription initiation factor TFIID signature 68 86 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 PRINTS Transcription initiation factor TFIID signature 158 174 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 FunFam TATA-box-binding protein 2 30 113 - -
Phco2g00872 222 Hamap TATA-box-binding protein [tbp]. 19 198 IPR000814 GO:0003677|GO:0006352
Phco2g00872 222 SUPERFAMILY TATA-box binding protein-like 21 114 - -
Phco2g00872 222 Gene3D - 26 195 IPR012295 -
Phco2g00872 222 Gene3D - 30 115 IPR012295 -
Phco2g00872 222 SUPERFAMILY TATA-box binding protein-like 112 199 - -
Phco2g00872 222 FunFam TATA-box-binding protein 2 114 195 - -