Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00868 ATGGCCTTCTACACCTCTCTCTTTCTGGGTCTCTTTGCTCTTCTTCTTCTTAGATCTTCTAAAGTTACATGCGAAGAAGCAGTTTCAGTTTCTCCAACTATTGACATTTCACTCAATCGGAACTCTTTCCCTGAAGGCTTCATCTTTGGAGCTGGATCTTCCTCCTACCAGTTCGAAGGTGCAGCAATGGAAGGTGGTAGAGGAGCAAGTGTATGGGATACTTTCACTCATAAATATCCAGGTAAGATCCAGGATAGAAGCAACGGAGACGTGGCCATCGACTCATATCATCTTTACAAGGAAGATGTTGGAATGATGAAGGATGTGAATTTGGATTCATACAGATTTTCCATATCTTGGTCAAGGATTCTTCCCAAAGGAAAACTAAGTGGGGGAATAAATCAAGAAGGAATAAACTACTACAACAACCTTATCAATGAGCTACTCGCTAATGGTATAAAACCATTTGTGACTATTTTTCACTGGGATCTTCCCCAAGCCCTAGAAGACGAGTATGGTGGTTTTTTAAGTCCATTGATAGTGAAGGATTTTCGAGATTATGCAGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAAGTATTGGGTTACATTGAATGAGCCGTGGAGTTACAGTCAAAATGGCTATGCAAATGGACAAATGGCACCAGGTCGTTGTTCTGCATGGATGAATTCAAATTGCACTGGTGGTGATTCTGCAACGGAGCCATATTTGGTTACACATCACCAACTTCTTGCTCATGCAGCAGCTGTTCGTGTCTACAAGACCAAGTATCAGACAACTCAGAAGGGTGTGATAGGCATAACCTTGGTAGCCAATTGGTTTTTGCCACTGAGAGATACCAAATCTGATCAAAAGGCTGCTGAAAGAGCAATTGACTTCATGTATGGATGGTTTATGGATCCATTAACTTTTGGAGACTATCCAAAAAGTATGAGATCACTTGTGAGAACAAGATTGCCAAAGTTCACCACAGAGCAAGCTAGATTACTTGTTGGTTCATTCGATTTTATTGGCCTAAACTATTACTCTACAACATATTCCTCTGATGCACCTCAACTAAGCAATGCCAACCCTAGCTACATAACTGATTCTCTTGTCACTGCTTCATTTGAACGCGATGGAAAACCTATTGGAATAAAGATTGCTTCTGATTGGTTATATGTTTATCCAAAAGGAATTCGTGATCTTTTATTATATACTAAGGAAAAGTACAATAATCCTTTGATTTACATCACAGAGAATGGTGTAAATGAGTATAATGAACCCTCCTTATCACTTGAAGAATCTCTTATGGATACTTTCAGAATTGATTATCATTATCGTCATCTCTATTATCTTCTATCGGCAATTAGGAATGGCGCAAATGTAAAAGGGTATTATGTATGGTCTTTCTTCGACAATTTTGAGTGGTCTTCAGGCTATACATCACGATTCGGAATGATCTTCATAGATTATAAAAATGGTTTGAAAAGATATAACAAACTCTCAGCAATGTGGTACAAGAACTTCCTCAAGAAAGAAACTAGACTTTTTGACTCTACTAAACTAGGTCACAAATGGCAGACCCCAGGAAACACACCAGTTATTAGTGAAACACCCAGAGTTAGGGGGAAGCCTGAGTCACAAGGTGCTGATGCGTGTGGTGTGAATAACACATTTGGGCGCAGCACAAGCAAAGAGCCTTGGGGGCACTAA 1719 0.3979 MAFYTSLFLGLFALLLLRSSKVTCEEAVSVSPTIDISLNRNSFPEGFIFGAGSSSYQFEGAAMEGGRGASVWDTFTHKYPGKIQDRSNGDVAIDSYHLYKEDVGMMKDVNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNLINELLANGIKPFVTIFHWDLPQALEDEYGGFLSPLIVKDFRDYAELCFKEFGDRVKYWVTLNEPWSYSQNGYANGQMAPGRCSAWMNSNCTGGDSATEPYLVTHHQLLAHAAAVRVYKTKYQTTQKGVIGITLVANWFLPLRDTKSDQKAAERAIDFMYGWFMDPLTFGDYPKSMRSLVRTRLPKFTTEQARLLVGSFDFIGLNYYSTTYSSDAPQLSNANPSYITDSLVTASFERDGKPIGIKIASDWLYVYPKGIRDLLLYTKEKYNNPLIYITENGVNEYNEPSLSLEESLMDTFRIDYHYRHLYYLLSAIRNGANVKGYYVWSFFDNFEWSSGYTSRFGMIFIDYKNGLKRYNKLSAMWYKNFLKKETRLFDSTKLGHKWQTPGNTPVISETPRVRGKPESQGADACGVNNTFGRSTSKEPWGH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00868 572 ProSitePatterns Glycosyl hydrolases family 1 active site. 417 425 IPR018120 -
Phco2g00868 572 SUPERFAMILY (Trans)glycosidases 38 513 IPR017853 -
Phco2g00868 572 Gene3D Glycosidases 28 514 - -
Phco2g00868 572 FunFam Beta-glucosidase 12 29 514 - -
Phco2g00868 572 PANTHER GLYCOSYL HYDROLASE 42 516 IPR001360 GO:0004553|GO:0005975
Phco2g00868 572 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Phco2g00868 572 MobiDBLite consensus disorder prediction 535 572 - -
Phco2g00868 572 PRINTS Glycosyl hydrolase family 1 signature 440 451 IPR001360 GO:0004553|GO:0005975
Phco2g00868 572 PRINTS Glycosyl hydrolase family 1 signature 461 478 IPR001360 GO:0004553|GO:0005975
Phco2g00868 572 PRINTS Glycosyl hydrolase family 1 signature 341 355 IPR001360 GO:0004553|GO:0005975
Phco2g00868 572 PRINTS Glycosyl hydrolase family 1 signature 417 425 IPR001360 GO:0004553|GO:0005975
Phco2g00868 572 PRINTS Glycosyl hydrolase family 1 signature 485 497 IPR001360 GO:0004553|GO:0005975
Phco2g00868 572 Pfam Glycosyl hydrolase family 1 40 515 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00868 Phco-Chr2 10333349 10369333 Dispersed/Transposed