Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00862 ATGGGCGTAGGAAGGGTGAACATATTTCAAAACATTTTGAAAGTATGGAAAAAAAAAGCTGGAATAGTTGCTCTTGCTCTGTGCACAACCCTGGTGTCAACAGTGGCTATAATTATTCTCCTATTCCAACCAGAATACTGCATCGCTAAGCGACACCCACCATGTACTCCATCGTCATGCGCCCAAATTCGCAACATATCTTACCCATTTCGCCTCAAAGGAGACCCAAGTCACTGCGGCGACACAAGGTATGAGTTAGATTGCGTTAACAACGCCACACTCTTAACCCTGTTCTCGGCAAAATTCCATGTACGAGATATCGACTACAAGCGATACAAAATCGTTGTTACTGACCCAGGTCAAGACGAGTACGCTAATTGCTCTTTCATCCCTCGCAATTTCTTAACGAATCGCAATTTCACCGAAGCGGTTGGCCCAGATGATTTCGGATCACAGCCGTTCACTTGTGACCCCAGGGAAATTTTCACTATCAGAATAGGGTACTTCAACTGCGTGAATCCTGTGAGTGACGATCCACGATATGTAAAGGTGGACATGAGTCGATGTGACAGCGGAGGGCACGTGTACGCTGTATTGGACATGTTTAGTGTGATGGACATCAAGGTTGGATGCGATCTAATGGTGGCTACGGTTTGGACACCGAAGCAGAATGTTACCTACCTTAACTGTGATGGGAAGGACACGTGCGATACGGAGATTACGGTACTGGACCGGATACCGGAGGTGAATATTAGCTACGATGAGATCCGTGGCGTGATAAGTAAGGGAATTCAGTTGTCGTGGTTGCCAGTTATTTGCGAGGATCGATGTGGAAGGGGAACCGACTGTAAGGTTATCAATGATTCCAACGGAGAATTCGTGTGTAAGAAGCATTACTGTCATTACGCCTACCACACCGCCGAAAAGTGCGAACCATGGCAACAGATTTTGGGCTACATTCGAGGAATAGGTAGCAGAATAACATTCAGCACGAAACAATTGGACAACCCAGTTGGACTGCAATATTTTGATGTAGGAATATTCATAGGACGAAACGTTATACCAATATTTTTGGCTGCCAGATGTCTGTTTGGAGTTGTACTTATTCTTCTTCTATTGATCTACAAATGGCGACGAAGACATTTTTCAATATATGAAAATATTGAAAATTTCTTGCTAGATAGCCATCTAAATCCCATTAGGTACGAATACAAAGAAATAAAAAAAATGACTCGAGGTTTCAAAGTGAAATTGGGTCAAGGAGGCTTTGGTTCTGTATATAAAGGAAAACTCCGAAGTGGGTTGGAGGTAGCAGTAAAGATGTTGACCAAATCCAATGATAATGGACAAGATTTCATGAATGAAGTAGCTACTATTGGAAGAATACATCATGTAAATGTGGTGCGTCTTATTGGATATTGTGTTGATGGAAAAAAGCGTGCTCTAGTTTATGAATTTATGTCAAATGGATCATTGGATAAATACATTTTCTCCAAAGAAGAAAGCACCCCTTTAAGCTATGAAAAAATATATGAAATATCTCTTGCAATAGCAGGTGGGATTGCCTATTTGCATCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTTTAGATGACAACTTTGTTCCGAAGGTTTCAGATTTTGGACTTGCAAAGCTACATGCTACAATTGATGGTGTTATGAGTATGACTGTTGCAAGAGGAACATTGGGTTATATGGCTCCAGAGTTGTTCTACAAAAATGTGGGCGGAGTATCTTATAAAGTCGATGTATATAGTTTTGGAATGCTTTTGATGGAAATGGCTAGTAGGAGGAGGAACTCACATCCTCAAGCAGAGCATTCAAGTCAACATTACTTTCCCTTTTGGATTTATGATCAATTTCAAGAAGAAAAGAATATTAACATTAAAGATGCTTCAGAAGAAGACAATATTCTAGTAAAAAAGATGTTCTTGGTAGCACTTTGGTGTATTCAGTTACATCCAAGTGATCGTCCTTCAATGAACAAGGTCATAGAGATGCTTGAAGGGATGATTGAACGTCTTGAATTGCCTCCGAGGCCTTCCTTCTACAAAAATGAAACATATAAACCTGATGATATTAGCACTGACTTCACCAAGTCTACTGATAGTGAGTTTAATGAAAACATTAAATTGGATTCACCAAAGAGTATTGACAAAGACATAAGTACTACTACTTAA 2223 0.4008 MGVGRVNIFQNILKVWKKKAGIVALALCTTLVSTVAIIILLFQPEYCIAKRHPPCTPSSCAQIRNISYPFRLKGDPSHCGDTRYELDCVNNATLLTLFSAKFHVRDIDYKRYKIVVTDPGQDEYANCSFIPRNFLTNRNFTEAVGPDDFGSQPFTCDPREIFTIRIGYFNCVNPVSDDPRYVKVDMSRCDSGGHVYAVLDMFSVMDIKVGCDLMVATVWTPKQNVTYLNCDGKDTCDTEITVLDRIPEVNISYDEIRGVISKGIQLSWLPVICEDRCGRGTDCKVINDSNGEFVCKKHYCHYAYHTAEKCEPWQQILGYIRGIGSRITFSTKQLDNPVGLQYFDVGIFIGRNVIPIFLAARCLFGVVLILLLLIYKWRRRHFSIYENIENFLLDSHLNPIRYEYKEIKKMTRGFKVKLGQGGFGSVYKGKLRSGLEVAVKMLTKSNDNGQDFMNEVATIGRIHHVNVVRLIGYCVDGKKRALVYEFMSNGSLDKYIFSKEESTPLSYEKIYEISLAIAGGIAYLHQGCDMQILHFDIKPHNILLDDNFVPKVSDFGLAKLHATIDGVMSMTVARGTLGYMAPELFYKNVGGVSYKVDVYSFGMLLMEMASRRRNSHPQAEHSSQHYFPFWIYDQFQEEKNINIKDASEEDNILVKKMFLVALWCIQLHPSDRPSMNKVIEMLEGMIERLELPPRPSFYKNETYKPDDISTDFTKSTDSEFNENIKLDSPKSIDKDISTTT 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00862 740 SUPERFAMILY Protein kinase-like (PK-like) 397 683 IPR011009 -
Phco2g00862 740 Gene3D Transferase(Phosphotransferase) domain 1 487 692 - -
Phco2g00862 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Phco2g00862 740 Gene3D Phosphorylase Kinase; domain 1 390 486 - -
Phco2g00862 740 MobiDBLite consensus disorder prediction 700 724 - -
Phco2g00862 740 SMART serkin_6 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00862 740 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00862 740 FunFam PR5-like receptor kinase 487 693 - -
Phco2g00862 740 FunFam serine/threonine-protein kinase PBS1-like 385 486 - -
Phco2g00862 740 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Phco2g00862 740 PANTHER RUST RESISTANCE KINASE LR10-RELATED 385 701 IPR045874 GO:0004672
Phco2g00862 740 Pfam Protein kinase domain 416 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00862 740 Pfam Wall-associated receptor kinase galacturonan-binding 55 118 IPR025287 GO:0030247
Phco2g00862 740 MobiDBLite consensus disorder prediction 697 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00862 Phco-Chr2 10208484 10215280 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00862 PK_Tyr_Ser-Thr 7.6e-48 CL0016