Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00860 ATGCTAAATTTTCAAAATCTCTTTCTTCTATTGACAGTGTTGTTTCTGCTATGGAAGCCTGCCATATGCAAAAGTGGGTGCAGGGAAAAGTGTGGCCGCGTTCACATTCAATTCCCATTTTACCTCAGAAATAGCGAGTTCAATCACACCACGGGCTATCCTCGTGGGTTCGGTCTGTTGTGTACGGATGCAGATGAGACTGTGCTGGATCTGCCTTCTGTTCCAATAAAATTGTTTGTAAAACACATAGATTACAAGGCACAGCAGATCCAACTCTACGACCCTCAAAATTGCTTTCCCAGGGAACTCATAAAGCTCGGCAATTCCTCTATTTCTCCATTTAAATTCAAATCATTTAGGGACCGGAATGTTTCCTTCTTCCGCTGCAACTCAATGTCATGCCCAATTTTGCAACTTGGATCTGAAAGTGACTTTCTTGATTCTGAGATAATATCGTGCACAAAGTTGAGTGATGTTTACTCCGTCCAGTGGTCTGTAGACGATGAGTTGAAGAACATCGTGGGTGCGGAATGGACCAACCCCAATTGCAGTTCCTGCGAAGCAAAAGGAAGTAAATGTAAATACAAGAATGGTACCCAAACTGAAATTGAATGTTTCGTTTGCCCCACAAACGGGCTTCCAACATCAACTATTATACTTATTGCTGCAGGGGGAATAGGTGGTTTCATTCTTGTGCTGCTACTGGCCAAGGTTTTGTTTCATGTGTATGAGCATTATAAGATGAAAGGAGAAGACCAAGCTCGGATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAGCCTACCAGATTCACTTACGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAGAGTTTAGGAGAAGGAGCTCATGGAGCAGTGTTCAAGGGAATACTCTCCCGTGATATTCTCGTTGCTGTGAAGATACTCAACGACGCAGTTGGAGATGGAAAGGATTTCACAAACGAAGTGGGAACCATGGGCAAAATTCATCATGTTAATGTTGTTCGCTTGCTTGGATTCTGTGCAGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTCCCAAATGGGTCACTGCAGAGATTCTTGGTTCCACCCGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGCTGCAACAAATTGCTCTTGGTGTTGCCAAAGGGATTGAGTATCTCCATCTGGGCTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTAATAGATGACCACTTCAATCCAAAGATCACTGATTTTGGACTTGCTAAATTGTGTCCTAAAAATCAAAGTACTGTGTCTGTGACTGCAGCCAGGGGAACCTTAGGCTACATTGCCCCTGAAGTTTTCTCAAGAAACTTTGGCAATGTATCTTATAAGTCTGACATTTACAGTTATGGAATGTTGCTTCTGGAGATGGTGGGAGGAAGAAAGAATACAAATATGTCAGTAGAAGAAAGTTTCCAAGTTCTGTACCCTGAGTGGATCCATAATTTGGTGGAAGCCCGAGATGTAGAAGTTACAATTGAGAAGGAAGAAGATGTTAAAATTGCAAGGAAACTTGCCATTATAGGACTTTGGTGTATTCAGTGGAACCCAGTGGACCGTCCATCCATGAAAACTGTGGTACAGATGCTTGAAGGAGACGGAGACAAGTTAATTGCACCTCCTACTCCTTTTGATAAGACCGGTTCTTCAAAAACAAATGCAGTTGTTCCAACAAGACACCAGAATTTCGAGTTGGAAATTATTCATGAAATTGAAGAGTAA 1785 0.4202 MLNFQNLFLLLTVLFLLWKPAICKSGCREKCGRVHIQFPFYLRNSEFNHTTGYPRGFGLLCTDADETVLDLPSVPIKLFVKHIDYKAQQIQLYDPQNCFPRELIKLGNSSISPFKFKSFRDRNVSFFRCNSMSCPILQLGSESDFLDSEIISCTKLSDVYSVQWSVDDELKNIVGAEWTNPNCSSCEAKGSKCKYKNGTQTEIECFVCPTNGLPTSTIILIAAGGIGGFILVLLLAKVLFHVYEHYKMKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGILSRDILVAVKILNDAVGDGKDFTNEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLVPPDNKDVFLGWEKLQQIALGVAKGIEYLHLGCDHRILHFDINPHNVLIDDHFNPKITDFGLAKLCPKNQSTVSVTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSVEESFQVLYPEWIHNLVEARDVEVTIEKEEDVKIARKLAIIGLWCIQWNPVDRPSMKTVVQMLEGDGDKLIAPPTPFDKTGSSKTNAVVPTRHQNFELEIIHEIEE 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00860 594 Pfam Protein kinase domain 285 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00860 594 Gene3D Phosphorylase Kinase; domain 1 255 355 - -
Phco2g00860 594 FunFam S-receptor-like serine/threonine-protein kinase 250 355 - -
Phco2g00860 594 PANTHER RUST RESISTANCE KINASE LR10-RELATED 253 570 IPR045874 GO:0004672
Phco2g00860 594 SUPERFAMILY Protein kinase-like (PK-like) 263 552 IPR011009 -
Phco2g00860 594 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Phco2g00860 594 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Phco2g00860 594 Gene3D Transferase(Phosphotransferase) domain 1 356 558 - -
Phco2g00860 594 FunFam PR5-like receptor kinase 356 561 - -
Phco2g00860 594 ProSiteProfiles Protein kinase domain profile. 281 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00860 Phco-Chr2 10186784 10188651 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00860 Pkinase 1.1e-43 CL0016