Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00859 ATGGAAAATGAAGGCTGGAATAGGTGTTCTTGCTCTGCACGCACTCTGGTGTCAATAATGGCTACAATTATTCTCCTATTCCAACCAGATTACTGCATCGCTAAGCGGCAACCACCATGTCCTCCTTCATCATGTGGCCAAATTCGCAACATATCTTACCCATTTCGCCTCAAAGGCGACCCAAACCAATGCGGCGACCCAAGGTATGAGTTAGACTGCGTTAACAACGCCACTCTCTTAACCTTGTTCTCGGGAAAATACCATGTACGAGATATCGACTACGAGCGATACAAAGTCGTTGTGATTGACCCGGGTCGAGAGGAGGAGGGGGCTAATTGCTCCTTAATCCCTCGCAATTTCTTAACGGACAGTAATTTCAGGCCCACGGGCCTGGTTGGCCCGGATGATTTCGGATCGCAGCCGTTCACTTGGGAACCCTGGGATACTTTAAGAATAGGGTACTTCAACTGCGTGAATCCTGTGAGTGACGATCCACGGTATGTTAAGGTGGACAGAGGTGAATGTGGCAGCGGAGGGCACGTGTACGCTGTTTTGGAACCATCGCTGTATAGGTGCCGGGTAAAGGACATAAAAATTGGGTGCGATCTGATGGTGGCTACAGTGGTTGATTGGACACCGAAGGAGAATGTTAGTTACGATGAGATCCGTGGCGTGATAAGTGAGGGAATTCGGTTGTCGTGGTTGCCTGTTATTTGCGAGGATCGATGTGGAAGGGGAACCCACTGTAAGGTGATCAATGAATCGAAGGGAGAAGTTGAGTGTGAGAAGCATTACTGCCATTACGCCTACCAAACTACCGATAAGTGCGAACCTTGGCAACAGATTTTTGGCTATATTCGAGCTTATCTTAGAGGCGTTATTTTTGGAATAGGTAGCAGAATAACATTCAGCACGAAACAATTGGACAACCCAGTTGGACTGCAATTTTTTGATGGAGGAATATTTATAGGACGAAATATTATACCAATATTTTTGGCTGCCAGATATCTGTTTGGAGTTGTACTTATTCTTCTGCTATTCATCTACAAATGGAGACGAAGACATTTTTCAATATATGAAAATATTGAAAATTTCTTGCAAGATAGCCATCTAAATCCCGTTAGGTACGAATACAAAGAAATTAAAAAAATGACTGGAGGTTTTAGAGTGAAATTGGGTCAAGGAGGCTTTGGTGCTGTATATACAGGAAAACTCCGAAGTGGGTTGGATGTAGCAGTAAAGATGTCGACCAAATCCAATGATAATGGACAAGATTTCATTAATGAAGTAGCTACCATTGGAAGAATACATCATGTAAATGTGGTGCGTCTTATTGGATATTGTGTTGATGGAAAAAAGCGTGCTTTGGTTTATGAATTCATGCCAAATGGATCATTGGATAAATACATTTTCTCCAAAGAAAACAGTACCCCTTTAAGCTATGAGAAAATATATGAAATATCTCTTGGAATAGCAGGTGGGATTTCATATTTACATCAAGGTTGTGATATGCAAATTCTGCATTTTGATATCAAGCCTCATAATATTCTTTTAGATGACAATTTTGTTCCGAAGGTTTCAGATTTTGGACTTGCAAAGCTACATGCTACAATTGATGGCGTTGTCAATATCACTGCAGCAAGAGGAACATTGGGTTATATGGCTCCAGAGTTGTTTTACAAAAATATGGGCGGGGTATCTTATAAAGCTGATGTATATAGTTTTGGAATGCTTTTAATGGAAATGGCAAGTAAGAGAAGGAACTCAAATCCTCAAGCAGAGAATTCAAGTCAACATTACTTTCCGTTTTGGATTTATGATCAATTTCAAGAAGAAAAAAATATGGACATAAGAGATGCTTTAGAAGATGACAATATTCTAGTGAAAAAGATGTTCTTGGTAGCACTTTGGTGTATTCAATTAAATCCAAGTGATCGTCCTTCAATGAATAAGGTGATAGAGATGCTTGAAGGGATGATTGAAAGCATTGAATTGCCTCCAAGGCCTTCATTTTACAAAAATGAAACATACAAACGTGATGATACTAATCCTGACTTCATTGAGTCCATTTACTCTGATAGTCAGCCTGATAAAAGAATAACATCAGATTCACCAAAGAGTATTGGCAAGGACATAAGTCATATAACATAA 2151 0.4026 MENEGWNRCSCSARTLVSIMATIILLFQPDYCIAKRQPPCPPSSCGQIRNISYPFRLKGDPNQCGDPRYELDCVNNATLLTLFSGKYHVRDIDYERYKVVVIDPGREEEGANCSLIPRNFLTDSNFRPTGLVGPDDFGSQPFTWEPWDTLRIGYFNCVNPVSDDPRYVKVDRGECGSGGHVYAVLEPSLYRCRVKDIKIGCDLMVATVVDWTPKENVSYDEIRGVISEGIRLSWLPVICEDRCGRGTHCKVINESKGEVECEKHYCHYAYQTTDKCEPWQQIFGYIRAYLRGVIFGIGSRITFSTKQLDNPVGLQFFDGGIFIGRNIIPIFLAARYLFGVVLILLLFIYKWRRRHFSIYENIENFLQDSHLNPVRYEYKEIKKMTGGFRVKLGQGGFGAVYTGKLRSGLDVAVKMSTKSNDNGQDFINEVATIGRIHHVNVVRLIGYCVDGKKRALVYEFMPNGSLDKYIFSKENSTPLSYEKIYEISLGIAGGISYLHQGCDMQILHFDIKPHNILLDDNFVPKVSDFGLAKLHATIDGVVNITAARGTLGYMAPELFYKNMGGVSYKADVYSFGMLLMEMASKRRNSNPQAENSSQHYFPFWIYDQFQEEKNMDIRDALEDDNILVKKMFLVALWCIQLNPSDRPSMNKVIEMLEGMIESIELPPRPSFYKNETYKRDDTNPDFIESIYSDSQPDKRITSDSPKSIGKDISHIT 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00859 716 Gene3D Phosphorylase Kinase; domain 1 361 460 - -
Phco2g00859 716 Gene3D Transferase(Phosphotransferase) domain 1 461 666 - -
Phco2g00859 716 SUPERFAMILY Protein kinase-like (PK-like) 371 657 IPR011009 -
Phco2g00859 716 MobiDBLite consensus disorder prediction 675 716 - -
Phco2g00859 716 SMART serkin_6 386 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00859 716 Pfam Protein tyrosine and serine/threonine kinase 390 656 IPR001245 GO:0004672|GO:0006468
Phco2g00859 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 359 676 IPR045874 GO:0004672
Phco2g00859 716 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Phco2g00859 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Phco2g00859 716 ProSiteProfiles Protein kinase domain profile. 386 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00859 716 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Phco2g00859 716 FunFam PR5-like receptor kinase 461 667 - -
Phco2g00859 716 CDD STKc_IRAK 392 659 - -
Phco2g00859 716 FunFam serine/threonine-protein kinase PBS1-like 358 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00859 Phco-Chr2 10168851 10178267 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00859 PK_Tyr_Ser-Thr 4.9e-47 CL0016