Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00855 ATGGAAGTGTACAGTGAGGAATGGTGGAATAAGTTGAATGCTTTGGCTTTGGAATTGGAAGTGCTTCCTATGCTCCAAACTCAGCCTGCCACGTCGAACAAGATCAATGTTCCTCCAATAATGCCGCTAACAACACCCCTCTCCAGTCATCTTCATCAACACGTTGCCGAAGCTCCTTCAATGTTGTCATCGTCTCAAACATCCCAAAACTGTGGCATCCAAGTTCAGTCGAGTAAACGAAAAAGGATTACTTGGACCATGGAAGAGCACAGGCTGTTTTTGGAAGGACTTCATATATATGGGAGAGGATACTGGAAAAAGATTTCAAATTACATTCAAACGAAAGATGCAACTCAAGTGGCAAGTCATGCACAAAAATATTTTATACGTAACAATATATCAAAAGAGAAAAAGAAAAGGAAAAGCATTCATGACCTGGTGCTAAGTCAACCAATGCAAGTGCAAGAAGGGATACACTTCAATCCTCCTATCAACATGCCCCATCCAAGACATCTAAATATTGTTAATACGTCTCATCAAATACCACCAATAACAGGAATGATGCAGTCAAATCATATCAACCATATAAATCATCATCCACAATATAATGGAATACATCAAACTATATATTAA 633 0.387 MEVYSEEWWNKLNALALELEVLPMLQTQPATSNKINVPPIMPLTTPLSSHLHQHVAEAPSMLSSSQTSQNCGIQVQSSKRKRITWTMEEHRLFLEGLHIYGRGYWKKISNYIQTKDATQVASHAQKYFIRNNISKEKKKRKSIHDLVLSQPMQVQEGIHFNPPINMPHPRHLNIVNTSHQIPPITGMMQSNHINHINHHPQYNGIHQTIY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00855 210 ProSiteProfiles SANT domain profile. 85 132 IPR017884 -
Phco2g00855 210 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 130 IPR006447 GO:0003677
Phco2g00855 210 SUPERFAMILY Homeodomain-like 78 131 IPR009057 -
Phco2g00855 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 132 IPR017930 -
Phco2g00855 210 ProSiteProfiles Myb-like domain profile. 77 128 IPR001005 -
Phco2g00855 210 SMART sant 81 130 IPR001005 -
Phco2g00855 210 CDD SANT 84 128 IPR001005 -
Phco2g00855 210 PANTHER TRANSCRIPTION FACTOR KUA1 50 177 - -
Phco2g00855 210 Gene3D - 83 133 - -
Phco2g00855 210 Pfam Myb-like DNA-binding domain 84 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00855 Phco-Chr2 10123523 10124270 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco2g00855 Myb_DNA-binding 3.3e-11 CL0123