Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00854 ATGAAAAGACGAGTAAGAATACCTATCATCGTCATTCTTCTGCTTCTACGAACTTGCGTAACAGCTCTCATCCCCAACTGTCCTGCTTCCTCCTGCGGCAACATTCCCAACATAACTTACCCCTTTCGACTCACCACCGACCCATCTCACTGCGGCGACATCAGGTACCAATTGCATTGTCAGAACAACGCCACTCTTCTAACCCTGTTTTCGGGTACATACAAAGTCCAACAAATCGATTACAAGAGATACAAAATTCGAGTGAGTGATGCAGAGGACGGTACCTGCTCCTGTAGCGATCCAATCACTGATGATCCTAGATATGTTGCTGTGGAAGGCAGAGGTTGCGAGCACAGAGGACACGTGTATGCTGTTGTTAGGGATTGGCCAAATGGTTTTGGTGTGCAGGACATCAAGGTTGGGTGCCAGCTGAAGGTGGCTACTTTAGCCACTGCGCGTGACTACAAAATGCTCTCTCAGGGATTTGAGCTCTCTTGGTTGTATGTTATTTGTGAAGATCGATGCGGAAAGGGAATAGAATGCAGTGTTGTGGATGAATCCACCGATGAAGTCCGATGTGACCCGCAAAATTGCCGATATATCTACGAACAACCTAACACAGTCACATACGACTGCAGCAGCGGTAGTACTGCAGCCGACATAATTTTCGGTATAGGTTTATTTTGCATTGGTCTTTACAGAGGATTTATGCAAAATTTTGGCTTGAATAAAGCTACAGGATATGACGGTGATAGCATGGCTGAAATAGGAAAAAGCGTCGGAAGGCTTTATCCTCTAGACAAAAGTATTATCACTTTGACTGATGCAAAAGGAACACTTGGATACATGGCGCCAGAGTTATTTTATCATAATATGGGGAGAGTATCACACAAATCAGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAATAAAAAAAGAAATTTTAATCCACATGCAGATGATTCAGGTGAACTTTTCTTCCCTTTTTGGATATACAATGAATTGAGTGGAGAAAATGAGATAAAAGGGAAAAGTGTTAGCAAGCAGGAATACAATAATGAGGTAAAGAAAATGTTTTTAGTAGCATTATGGTGTATACAACTGAAACCAAGTGATCGTCCTCCAATGAACAAAGTAGTTGAGATGCTTGAAGGAGAACTTGAGAACATTGAAATGCCTCCCAAACCTTTCCTATATCAGGTAAATGATCATAATATTAAATCTTACCAAACCCTTTCAAATGATTCTAGTGGATCAACAAGTTATACTGAGGATACTGTTCTTATTTCTTCTGAACATTCTACTTGA 1317 0.41 MKRRVRIPIIVILLLLRTCVTALIPNCPASSCGNIPNITYPFRLTTDPSHCGDIRYQLHCQNNATLLTLFSGTYKVQQIDYKRYKIRVSDAEDGTCSCSDPITDDPRYVAVEGRGCEHRGHVYAVVRDWPNGFGVQDIKVGCQLKVATLATARDYKMLSQGFELSWLYVICEDRCGKGIECSVVDESTDEVRCDPQNCRYIYEQPNTVTYDCSSGSTAADIIFGIGLFCIGLYRGFMQNFGLNKATGYDGDSMAEIGKSVGRLYPLDKSIITLTDAKGTLGYMAPELFYHNMGRVSHKSDVYSFGMLLMEMANKKRNFNPHADDSGELFFPFWIYNELSGENEIKGKSVSKQEYNNEVKKMFLVALWCIQLKPSDRPPMNKVVEMLEGELENIEMPPKPFLYQVNDHNIKSYQTLSNDSSGSTSYTEDTVLISSEHST 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00854 438 ProSiteProfiles Zinc finger SWIM-type profile. 84 127 IPR007527 GO:0008270
Phco2g00854 438 Pfam Protein kinase domain 273 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00854 438 SUPERFAMILY Protein kinase-like (PK-like) 262 419 IPR011009 -
Phco2g00854 438 MobiDBLite consensus disorder prediction 413 438 - -
Phco2g00854 438 PANTHER RUST RESISTANCE KINASE LR10-RELATED 266 408 IPR045874 GO:0004672
Phco2g00854 438 Pfam Wall-associated receptor kinase galacturonan-binding 27 90 IPR025287 GO:0030247
Phco2g00854 438 Gene3D Transferase(Phosphotransferase) domain 1 238 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00854 Phco-Chr2 10109285 10116266 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00854 Pkinase 4.9e-09 CL0016