Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00853 ATGCTGGTGTTTCTACTTCAGCAAATTGGTGCTACAAAACAGTATGATCATGCGTGTCCCTCTTCTTCGTGTGGCAAAGTCACCAACATAACGCATCCATTCCGATTAAAAGGCGACCCAGAACACTGCGGCGACAACAGGTACGAGCTCACCTGTGAAAATAATGTTGCCATTTTATCTTTGTACTCCGGAAAATTTCATGTTCAGGCAATCAACTACAACAATTTCACAATTCGACTGGTGGATCCCGGCGTTCAACAATTAAATTGCTCCGCCATTCCTCGCTATTTCTTGTCACGATCCAATTTCAGCGATTCCTATGATTTCAGCAACATAGATATGGAAGCATACCAAACTAGTCAACAACGATTATCTGATCAACCTGTCTATTTTAATCATAGAAAGGTGAACGTGATTGGTTCAGAGCCGGTTTCCGAACATGTAGTTTTCATGAATTGTAGGCATCCAGTGAGTGACAATGGTAAGTATGTAGATACTGCTCCCTGCGTGAATTGGCACTCCAAAGGTTATACATATGCTATCGCTGGTGACTTAATCTCAGAGGATTTAGAGGTTGGTTGTGATGTAAAGCTGGTTACTCCCACATCTTGGTGGGGTTTGAACACAACTCAACATTCCTACACTGAGATGTATAAGGCACTAGTGTATGGGTTTGAGATTTCGTGGATGATTCGCGCCTGTGAGGACATTTGTGGAAAGTCTGTGGCTCGCTACTGCAGATGGAACCTTTCCGGGAAGGTCGATTGCTCGCTCAACTGCCACAGTTTCCTGGGAATTTTGCATATATGCGATGGTAGTGGGATATGGTACCAGCTTCTATTATATGCAAGAGATACTCTTTATGCTCTCTGGATAGGTCTGGTTCAAACAATAAAAGGACAAAATGATGGATTTGATGATGTCGGCAACTATAAATTAGGATTAATTATAGGACACTACGTTTTACCATCCTTCTGGGCAGGAAAATTTTTGTTTGGAATGACTTTATTTATTGCACTGTTGGTATACAAATGGAAAGGTCGACATTTGTCTATGTATGAAGGTATTGAAAATTACTTGGAACATGCCAATTTGATGCCTATTAGATATTCATACAAAGAAATCAAGAAAATGATCGGAGGTTTCAAAGACAAGTTGGGTGAAGGAGGATATGGTTCTGTATTTAAGGGAAAGTTGTGTAGCGGATCTTTTGTGGCAATAAAAATGTTAGGTAAATCCACACGAGATGGACAAGATTTTATCAGCGAAGTTGCAACTATTGGAAGAATATACCATCAAAATATAGTCAAATTAGTAGGATTTTGTGTTGAAGGATCAAAACGTGCACTTGTGTACGAATTCATGTCAAATGGATCTCTAGATAAAATAATTTTTTCTAAAGATGGAAATGTAGATTTAAGCTATGATGAAATATATAATATTTCAATTGGAGTAGCTCGGGGGATTGCTTATTTTCACCATGGGTGTGAGATGCAAATTCTGCATTTTGATATCAAGCCCCACAACATCTTGCTAGATGGAAAACTCACCCCAAAGGTCTCTGATTTTGGATTGGCAAAATTATATCCAATAGATAATAGCATTGACACCATGACAGGAGCAAGAGGAACAATTGGGTATATGGCTCCAGAATTATTTTATAAAAATATTGGAAGAATATCTCACAAGACTGATGTATATAGCTTTGGAATGCTTCTGATGGAGATGGCAAATAAAGGGAAAAACCTAAATTCCCATGCAGAGCATTCAAGTCAACTATATTTTCCCTTTTGGATTCATAAGCATATAGAAAAAGAAAAGGATATAGAAATTGAAGATGCCAACAAGAAAGAAAAGGAACAAGTAAAAAGAATGATTATAGTTGCACTTTGGTGTATACAATTGAATCCAAATGATCGTCCCACGATGAATGAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAACTTGAAAATACCTCCAAAGCCTACTTTATATCCAGATGAAACAATGTCAAGTGACCTAGGCTACACTAGTTCTTCCAATTCTTCCATGTAA 2058 0.3819 MLVFLLQQIGATKQYDHACPSSSCGKVTNITHPFRLKGDPEHCGDNRYELTCENNVAILSLYSGKFHVQAINYNNFTIRLVDPGVQQLNCSAIPRYFLSRSNFSDSYDFSNIDMEAYQTSQQRLSDQPVYFNHRKVNVIGSEPVSEHVVFMNCRHPVSDNGKYVDTAPCVNWHSKGYTYAIAGDLISEDLEVGCDVKLVTPTSWWGLNTTQHSYTEMYKALVYGFEISWMIRACEDICGKSVARYCRWNLSGKVDCSLNCHSFLGILHICDGSGIWYQLLLYARDTLYALWIGLVQTIKGQNDGFDDVGNYKLGLIIGHYVLPSFWAGKFLFGMTLFIALLVYKWKGRHLSMYEGIENYLEHANLMPIRYSYKEIKKMIGGFKDKLGEGGYGSVFKGKLCSGSFVAIKMLGKSTRDGQDFISEVATIGRIYHQNIVKLVGFCVEGSKRALVYEFMSNGSLDKIIFSKDGNVDLSYDEIYNISIGVARGIAYFHHGCEMQILHFDIKPHNILLDGKLTPKVSDFGLAKLYPIDNSIDTMTGARGTIGYMAPELFYKNIGRISHKTDVYSFGMLLMEMANKGKNLNSHAEHSSQLYFPFWIHKHIEKEKDIEIEDANKKEKEQVKRMIIVALWCIQLNPNDRPTMNEVVEMLEGDIENLKIPPKPTLYPDETMSSDLGYTSSSNSSM 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00853 685 MobiDBLite consensus disorder prediction 661 685 - -
Phco2g00853 685 PANTHER RUST RESISTANCE KINASE LR10-RELATED 355 671 IPR045874 GO:0004672
Phco2g00853 685 MobiDBLite consensus disorder prediction 671 685 - -
Phco2g00853 685 Pfam Wall-associated receptor kinase galacturonan-binding 19 82 IPR025287 GO:0030247
Phco2g00853 685 FunFam PR5-like receptor kinase 455 662 - -
Phco2g00853 685 SMART serkin_6 380 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00853 685 ProSiteProfiles Protein kinase domain profile. 380 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00853 685 Gene3D Transferase(Phosphotransferase) domain 1 455 659 - -
Phco2g00853 685 Gene3D Phosphorylase Kinase; domain 1 356 454 - -
Phco2g00853 685 FunFam serine/threonine-protein kinase PBS1-like 351 454 - -
Phco2g00853 685 Pfam Protein kinase domain 383 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00853 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Phco2g00853 685 SUPERFAMILY Protein kinase-like (PK-like) 365 651 IPR011009 -
Phco2g00853 685 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00853 Phco-Chr2 10089621 10092834 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00853 Pkinase 1.7e-47 CL0016