Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00852 ATGCATAGACTCGCCCTAATTTTTTTATTTTTTATTTTGGTGCAACGCTATGAGCAAGAAGAGGCACCAAGTGTGGTTCTGTCTGGTTTTTTCTTTTCCCAAAAGAGAACAAGCACCTGCATTGCTGGGATGGGCGAGTCTAGTATGCTACCCCTCCAAGGTGATTCCATATTGATAACACTATTGCTGATACTCTTGCTTGCAGTAAGTAGCAGCGGTCAAAACGAGTGCTCGAAATTGTCTTGTGGGTTTCAAGAACCGCCTATTAGATTTCCCTTCCAACTCCTCCAGGGGATGAAAGATGCATGTGATTCTCCCGGTTTCTGTGTCTATTGCAGTGAAAATAAGGAGACCATGCTTGTGCACCCTACAGTAAAACTCCGTGTCACAGAAATAAACTACCCATATCAGTTTACTTACTTGGAAGATCCTGAAAATTGCCTTCCGAAGAAGTTTCTAAACCTCAACAATTTTACTATTCCTCCTTACGAACTTCATTCATCAGATGGACTTGAAGGATACAACAACTTGAACTTCTTCGATTGTTCTTTACTTGGGCTTACATACCTTAGAAACCGCGACCAGTTATCCCCGCCTTCGCAAGATATGATTCATTGTCCAACTTATGTTTCTAACTCTTACGAAAGTATCCTTGAATTGGACCTAACATCTTGTACCAAGATGTTCAACATCATTTCGCAGGCCTCGGCCTCTGACCTGCGGAAGAATCGGTTGAATTTGAGATGGTCCAAACCAAGTTGTAGTGAGTGCGAAGCAAAAGGCAAGAGATGTAAATGGAAGAAGAACAGCAAAACGGACATCGAATGTGTAGACTGCAGTGGCAAACCAAGAAAAATTCACATTCCCAGATCTGTTATTTTCACTGCTGCAGGTTCTATTTTTTTGGGGCTGGCGGTTATTGCCGTCTTTAAGATAGACCACCATTTTAGAAAGAAAGAAGAAGACCAAGCTAGAGTGGATAAGTTTCTACAGGATTACAGGGCAGATAAGCCTGCAAGATTTACCTATGCTGATATTAAAAGAATCACAGGTGGTTTTAAAGAGAAGTTAGGGGAAGGAGCTCATGGAGCTGTATTTAGAGGAAAGCTTTCTAATGAGATTCTGGTGGCTGTGAAGATCCTCAATAATACAGAGGGAGATGGGAAGGATTTCATCAATGAAGTTGGAATTATGGGAAAAATCCACCACATAAACGTGGTTCGTTTGATTGGGTTTTGTGCAGAAGGACTCTATCGTGCTCTTGTCTACAATTTATTTCCAAACGGTTCGCTACAAAGCTTCATATTTCCACCGGACGACAAGGACCATTTTCTTGGCTGGGAGAAGCTGCAACACATTGCTCTTGGCATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCGTCCCATTATTCACTTTGACATCAACCCTCACAATGTGTTACTCGATGACAACTTCACTCCGAAAATTTCTGACTTTGGGTTAGCCAAATTGTGTTCAAAGAATCCTAGTTTGGTGTCCATGACAGCTGCAAGGGGAACCTTGGGATACATTGCACCAGAAGTTTTTTCCAGAAACTTTGGAAATGTGTCTTATAAATCTGATATCTACAGTTATGGAATGTTGTTGTTGGAAATGGTTGGAGGAAGGAAGAATGTAGACATATCTTCAGCACAAAATTTTCATGTTCTCTACCCTGATTGGATCCATAACCTGGTTGATGGAGATATCCATATCCATGTTGAGGATGAAGATGAAGTTAAAATTGCAAAGAAACTAGCAATTGTTGGACTTTGGTGTATTCAGTGGCAGCCAGTGAACAGACCATCCATAAAATCTGTCTTACAAATGTTAGAAACTGCAGAGGAAAACCAGTTAACTGTTCCTCCTAACCCATTTCACTCAACGACCTCCACTGCTACTGGTAGACTCACTTCAGCAAGACCTCCTATGGTGTTGGAAGCGATTCAAGAATAA 1983 0.413 MHRLALIFLFFILVQRYEQEEAPSVVLSGFFFSQKRTSTCIAGMGESSMLPLQGDSILITLLLILLLAVSSSGQNECSKLSCGFQEPPIRFPFQLLQGMKDACDSPGFCVYCSENKETMLVHPTVKLRVTEINYPYQFTYLEDPENCLPKKFLNLNNFTIPPYELHSSDGLEGYNNLNFFDCSLLGLTYLRNRDQLSPPSQDMIHCPTYVSNSYESILELDLTSCTKMFNIISQASASDLRKNRLNLRWSKPSCSECEAKGKRCKWKKNSKTDIECVDCSGKPRKIHIPRSVIFTAAGSIFLGLAVIAVFKIDHHFRKKEEDQARVDKFLQDYRADKPARFTYADIKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKILNNTEGDGKDFINEVGIMGKIHHINVVRLIGFCAEGLYRALVYNLFPNGSLQSFIFPPDDKDHFLGWEKLQHIALGIAKGIEYLHQGCDRPIIHFDINPHNVLLDDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDISSAQNFHVLYPDWIHNLVDGDIHIHVEDEDEVKIAKKLAIVGLWCIQWQPVNRPSIKSVLQMLETAEENQLTVPPNPFHSTTSTATGRLTSARPPMVLEAIQE 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00852 660 Gene3D Phosphorylase Kinase; domain 1 324 425 - -
Phco2g00852 660 Pfam Protein kinase domain 354 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00852 660 Gene3D Transferase(Phosphotransferase) domain 1 426 633 - -
Phco2g00852 660 ProSiteProfiles Protein kinase domain profile. 351 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00852 660 SUPERFAMILY Protein kinase-like (PK-like) 334 622 IPR011009 -
Phco2g00852 660 MobiDBLite consensus disorder prediction 628 651 - -
Phco2g00852 660 FunFam PR5-like receptor kinase 426 631 - -
Phco2g00852 660 PANTHER RUST RESISTANCE KINASE LR10-RELATED 323 638 IPR045874 GO:0004672
Phco2g00852 660 MobiDBLite consensus disorder prediction 628 647 - -
Phco2g00852 660 FunFam serine/threonine-protein kinase PBS1-like 317 425 - -
Phco2g00852 660 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Phco2g00852 660 Pfam Wall-associated receptor kinase galacturonan-binding 77 137 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00852 Phco-Chr2 10087110 10089568 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00852 Pkinase 3e-43 CL0016