Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00850 ATGGGGAGAAAAGGAAGCAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCATCTTCTAAAGACTTGCCAGAGCCTGAGAAGAAGAAAGACAGCACACAAAAATTACAGCATGAAGTGGCAGAGGTGGTGTCTTTTGAGCATTTCCCAGTAGAGAGTTCTCCGGATAATAATCCGACAAATGAAGAGAGTGGCACTTCATCTCCAGTTACAGAAGATAGAAGCCACGCCATTGCCGTTGCAGCAGCTACTGCCGTAGCCGCGGAAGCTGCCGTGGCGGCTGCTCAAGCAGCTGCAAGAGTAGTGAGATTGGCAGGTTATGGACGCCACTCCAAGGAAGAAAGAGCAGCAATACTCATTCAATCATACTACAGAGGCTATCTAGCTCGGCGTGCACTGCGAGCGTTGAAGGGATTAGTGAGGCTGCAAGCACTGGTGAGGGGACACAATGTGAGAAAGCAAGCCCAAATGACTATGCGATGCATGCAAGCACTGGTGAGGGTGCAGGCCCGAGTAAGGGCTCGCCGACTCCAACTGAGTCACGTCAACGAGGAAAGACAACAATATGAGAAGATCGAAGAGCCCAAGCCCAAGCCCACCATGCCCATGAGCCCCATGAGAAGGACACACATCAATAATGATTGGGACAATAGGCGTCAAAGTAGCTACAAGATTAAGGAAAACGATTTGAGGAAACATGAAGCTACAATGAAGAGGGAGAGAGCTCTCGCTTACGCTTTCAACTATCAACAGCAACAGCAGCAGCAGCAAAAACAATATTTGTTGGGTGAATGGAAGGGTAAGGATGAAATAGGTGGAATAAAGGAAAAAGGGCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAACCAGAGAATGTGAGGAACATGGGGCCACGTGAGACCTCTTACATGACTCATGCTTCTTCAACATCGACCACCACAGATAACATGTCTGAGAAGACCGTGGAAATGGATATGATTGCAACTCCAGCCCCAACCAATGTCAGAAGCATAAGCCCCATAAACTCAGACTTTATTGATTCAAGCCCACTCTCAAATAGGCACAATCATCATATACCTCCCAGCCCAAATAGACGTTATATGGCCCCAACTCAGTCTGCAAAGGCTAAGGTTCGGGCTCAAGGCCCATCGAAGCCTCGGGTTTCAGCTGGGCCTCAGTGGAACTCCTCAATGAAGGGAGGCTCAACCTGCGACTCGTCTAGTTCAGGTGGAGGAATCACCGCTTACCAAATTCCAAGAAGTCCAGGACCAAAAATTAATGGCATTCGTTCACAGTCCAGAAGGGTTGTGGGTAGCAGTCCAGATTACATTGAGGATTGGGCCCTTCCTCTTGGAACCCATGGTTGGGCTTAG 1383 0.4888 MGRKGSSWFSSVKKVFKSSSKDLPEPEKKKDSTQKLQHEVAEVVSFEHFPVESSPDNNPTNEESGTSSPVTEDRSHAIAVAAATAVAAEAAVAAAQAAARVVRLAGYGRHSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHVNEERQQYEKIEEPKPKPTMPMSPMRRTHINNDWDNRRQSSYKIKENDLRKHEATMKRERALAYAFNYQQQQQQQQKQYLLGEWKGKDEIGGIKEKGQWGWNWLERWMSSQPENVRNMGPRETSYMTHASSTSTTTDNMSEKTVEMDMIATPAPTNVRSISPINSDFIDSSPLSNRHNHHIPPSPNRRYMAPTQSAKAKVRAQGPSKPRVSAGPQWNSSMKGGSTCDSSSSGGGITAYQIPRSPGPKINGIRSQSRRVVGSSPDYIEDWALPLGTHGWA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00850 460 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Phco2g00850 460 MobiDBLite consensus disorder prediction 349 432 - -
Phco2g00850 460 MobiDBLite consensus disorder prediction 51 72 - -
Phco2g00850 460 SMART iq_5 112 134 IPR000048 GO:0005515
Phco2g00850 460 SMART iq_5 135 156 IPR000048 GO:0005515
Phco2g00850 460 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Phco2g00850 460 MobiDBLite consensus disorder prediction 18 37 - -
Phco2g00850 460 MobiDBLite consensus disorder prediction 186 213 - -
Phco2g00850 460 MobiDBLite consensus disorder prediction 391 418 - -
Phco2g00850 460 Gene3D - 110 164 - -
Phco2g00850 460 PANTHER IQ-DOMAIN 5-RELATED 1 405 - -
Phco2g00850 460 MobiDBLite consensus disorder prediction 1 72 - -
Phco2g00850 460 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Phco2g00850 460 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00850 Phco-Chr2 10047060 10054144 Transposed