Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00839 ATGTCAAAGGCGGTGGTTTATATCCTAATAGCCACCGCCGTGTTGTTCTACAAATGCTTGTCCCCATTGAACCTGGGCGTACCGAAGAGTCGCCTTAATCGCAGGTTCGGGTACAAGCTACTTGAACGAGCACCGAGTTTTGACCCTCTTGTGACAAATAATGGGAGAGAGGTTGAAAAGAAAACCATTCACCAGGAACCTTCTCCTCGTACCTTCTCCAATTTGGACAGTACCACGTCGCCTGTTGATATTTCAGGGGCATACCAATATCTTACCTCTGGCGGAAAATTGAACACCACGTTAAGGTTGATCATCTTGTTCCCTTTGTTAGATAGAGAACCCAAAGATGGGGTAGTTGGTTTCGAAGAGTTAGAGGCTTGGATTACTCAACGAGCAACAGAGAGATTAGATTATCTCACGCAAGCAGAGTTGGATTCCAAAGACAACAATGGGGATTTGGCCATTTCTTTTAAGGAGTATTTACCTCAGTTTTCTCAAAAGCATTTGGAGGAAAACAAAATGCTACATGGCGAAGCAGGATGGTGGAACAAAAGATTTGAAGTTGCAGACATTGATCACAATGGGCTTCTGAATTTCACCGAACTTAGAGATTTTTTGCATCCAGAAGATAGCCAAAATCAAGAAACGCAAAAGTGGATGTTGAGAGATAGACTAAAGCGCATGGACGATGAAAAAGATGGGAAAATGAACTTCGGTGAATTTGAAAACCATGTATACAATACATACGAAAGTTACATGACCTTTGAAACTAATGGAGGAATTGTACCTTCTCCAAAAGACAAATTTGTCCAGCTTGATGTAAACAAAGATCAATTTTTGTCACCAGAAGAATTACTACCAATTCTTTCTTATATCTACCCTGGCGAGCTAGCTTATGCTAAATATTTCACATGCTATTTAATGAATGAGGCTGATGATAATGGAGATAGAAAGTTGACACTTCAAGAGATGCTTGATCATGAAACTATTTTCTACAGTACAGTTCATGCAGATGGCCACCAAGAAAGCGATGATGATCATGATGAGCTTTGA 1053 0.4055 MSKAVVYILIATAVLFYKCLSPLNLGVPKSRLNRRFGYKLLERAPSFDPLVTNNGREVEKKTIHQEPSPRTFSNLDSTTSPVDISGAYQYLTSGGKLNTTLRLIILFPLLDREPKDGVVGFEELEAWITQRATERLDYLTQAELDSKDNNGDLAISFKEYLPQFSQKHLEENKMLHGEAGWWNKRFEVADIDHNGLLNFTELRDFLHPEDSQNQETQKWMLRDRLKRMDDEKDGKMNFGEFENHVYNTYESYMTFETNGGIVPSPKDKFVQLDVNKDQFLSPEELLPILSYIYPGELAYAKYFTCYLMNEADDNGDRKLTLQEMLDHETIFYSTVHADGHQESDDDHDEL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00839 350 PANTHER RETICULOCALBIN 90 338 - -
Phco2g00839 350 SUPERFAMILY EF-hand 181 332 IPR011992 -
Phco2g00839 350 ProSitePatterns EF-hand calcium-binding domain. 190 202 IPR018247 -
Phco2g00839 350 Gene3D - 97 254 - -
Phco2g00839 350 ProSitePatterns EF-hand calcium-binding domain. 273 285 IPR018247 -
Phco2g00839 350 ProSitePatterns EF-hand calcium-binding domain. 312 324 IPR018247 -
Phco2g00839 350 Gene3D - 263 330 - -
Phco2g00839 350 FunFam Calcium-binding EF hand family protein 182 245 - -
Phco2g00839 350 ProSiteProfiles EF-hand calcium-binding domain profile. 177 212 IPR002048 GO:0005509
Phco2g00839 350 SMART efh_1 220 248 IPR002048 GO:0005509
Phco2g00839 350 SMART efh_1 264 292 IPR002048 GO:0005509
Phco2g00839 350 SMART efh_1 181 209 IPR002048 GO:0005509
Phco2g00839 350 FunFam Reticulocalbin-3 246 330 - -
Phco2g00839 350 SUPERFAMILY EF-hand 101 168 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00839 Phco-Chr2 9804849 9806905 Dispersed