Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00827 ATGGACAAAGGGTGGCTTTCTAGTGAGGGTGTTGGAGGTTTGGGGGTGATGGGATACATGGGTAGGTGTTGGTTAGTTGGGGTCATAATTGTGGTGGGGTGTGCCATCTTGCTGGGCACTGCTGGAGTAGAAGGGTATCCAGCTGAGGATTTGGTGGTGAGGTTGCCTGGTCAACCTAATGTTGGGTTTAAGCAATTTGCTGGGTATGTTGATGTTGATCTCAAGCATGGAAGGAGCCTCTTCTACTATTTTGTGGAGGCTGAGAAAGACCCTGACAAGAAGCCCCTTACACTTTGGCTCAATGGAGGCCCTGGATGTTCTTCCATTGGAGGAGGTGCTTTTACTGAATTGGGACCCTTTTATCCTAATGGTGATGGACGTGGTCTTCGAAGAAATTCGATGTCTTGGAATAAAGCATCCAACCTCATTTTTGTAGAGTCCCCTGCGGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTACAATTCTGGAGATGTCTCCACTGCCAATGATATGTATTTGTTCATGTTGAAATGGTACGAGAAGTTTCCATCATACAGAACAAGGGAGCTGTTCCTCACTGGAGAAAGCTATGCAGGACACTATGTACCTCAATTAACTAATGTTCTCTTGGACCATAATGCTGGTTCAACTGGTTTCAAATTCAATATCAAAGGAGTTGCTATTGGAAACCCACTTTTGAGACTTGATCGGGATGCACCAGCAACATATGAATTCTTCTGGTCACATGGAATGATTTCTGATGAAATTGGCCTTGCCATTATGAATGATTGTGATTTTGATGATTATTCCTATGCAAGTCCTCACAACATTTCTCATTCCTGCAACAATGCCATATACGAAGCAAATCTCATTGTTGGCGATTACATAAACAACTATGATGTAATTCTAGATGTTTGCTATCCATCCATAGTGGAACAAGAACTGAGATTGAAAAGAATGGCAACAAAAATAAGTGTAGGTGTGGATGTGTGTATGAGTCTAGAAAGACGGTTTTACTTCAATCTCCCAGAGGTTCAGAAGGCTCTTCATGCAAACCGTACAAACCTTCCTTATAGCTGGTCCATGTGTAGTCATGTTCTAAACTACAGTGACAAGGATGGTAACATCAACATCCTTCCAATTCTCAAAAGAATAGTCCAAAACCATATCCCAGTATGGGTTTTCAGTGGAGACCAAGATTCAGTTGTGCCCTTATTGGGATCTCGAACACTCATTCGTGAACTAGCTCATGAATTGCAATTCAAGATTACAGTCCCATATGGGGCTTGGTTCCACAAAGGGCAGGTTGGAGGTTGGGTGACTGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGAGGTGCTGCTCACATGGTACCTTATGCTCAACCTTCAAGAGCACTGCATCTGTTCAGTTCATTTGTGCGTGGCAGGAGATTACCCAACACAACTCGTCCTTCAATTGATGATTGA 1479 0.4293 MDKGWLSSEGVGGLGVMGYMGRCWLVGVIIVVGCAILLGTAGVEGYPAEDLVVRLPGQPNVGFKQFAGYVDVDLKHGRSLFYYFVEAEKDPDKKPLTLWLNGGPGCSSIGGGAFTELGPFYPNGDGRGLRRNSMSWNKASNLIFVESPAGVGWSYSNTTSDYNSGDVSTANDMYLFMLKWYEKFPSYRTRELFLTGESYAGHYVPQLTNVLLDHNAGSTGFKFNIKGVAIGNPLLRLDRDAPATYEFFWSHGMISDEIGLAIMNDCDFDDYSYASPHNISHSCNNAIYEANLIVGDYINNYDVILDVCYPSIVEQELRLKRMATKISVGVDVCMSLERRFYFNLPEVQKALHANRTNLPYSWSMCSHVLNYSDKDGNINILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELQFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNTTRPSIDD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00827 492 Gene3D - 333 369 - -
Phco2g00827 492 FunFam Carboxypeptidase 380 479 - -
Phco2g00827 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Phco2g00827 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Phco2g00827 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Phco2g00827 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Phco2g00827 492 Gene3D alpha/beta hydrolase 47 309 IPR029058 -
Phco2g00827 492 Gene3D - 380 479 - -
Phco2g00827 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 466 IPR001563 GO:0004185|GO:0006508
Phco2g00827 492 FunFam Carboxypeptidase 46 310 - -
Phco2g00827 492 Pfam Serine carboxypeptidase 57 479 IPR001563 GO:0004185|GO:0006508
Phco2g00827 492 SUPERFAMILY alpha/beta-Hydrolases 48 482 IPR029058 -
Phco2g00827 492 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Phco2g00827 492 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00827 Phco-Chr2 9503101 9508406 Transposed