Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00816 ATGACCGCACCACAACTTCAGTTTCCCCCGGGATTCAGATTCCACCCCACAGACGAAGAACTCGTCGTTCATTACCTCTGCCGCAAATGCGTCAACCAACAAATCGCCGTTCCCATAATCGCCGAAATCGACCTCTACAAATACGACCCTTGGAACCTCCCAGGAATGGCGTTGTACGGAGAGAAAGAGTGGTATTTCTTCACGCCGAGGGAACGGAAGTACCCGAACGGTTCGAGGCCGAATCGGTCCGCGGGAACCGGGTACTGGAAAGCAACTGGAGCAGATAAACCGATTGGTAAACCAAAACCGGTTGGGATAAAAAAAGCGTTGGTGTTTTACGCTGGAAAAGCGCCCAAGGGAGAGAAAACAAACTGGATCATGCACGAGTATCGTCTCGCCGACGTGGACCGTTCCGTTAGCAGAAAAAACAGCTTGAGGCTGGATGACTGGGTGCTGTGTCGCATATACAACAAGAAAGGCGCGGTTCAGAAGCAACCACCGCTCAAAATTGAGCGCTTCGAATTGGAGGACAAGAAGCCGCCGATTGCGCAGCCAAACGCGGAGACCACAGAGGCGGACTGCATGCACTTCGAGGCGTCGGACTCGGTGCCACGACTGCTGACCACGGACTCCAGCTGCTCGGAGCAGGTGGTGTCGCCGGAGCTGGCGAGCGAGGTGCAGAGCGAGCCGAAGAGGAGAAACAGCGAGTTCGCGTACAATTACGTGGATGCCACTCTGGCGTCGGAGTTCCATAGCGCAAATCATATGTCGCCGCTGCAGGATATCTTCATGTACCTCTCCAAACCGATGATGGCAATTCTTGGTTGGGGAAGAATGGTAGAAGTGAAAGGTGAGGAAGATGCAGCCATTATTGGGTTGGTGAGAAATGTATGGTTGGGCATACTTATGCAGTGGTGA 918 0.5349 MTAPQLQFPPGFRFHPTDEELVVHYLCRKCVNQQIAVPIIAEIDLYKYDPWNLPGMALYGEKEWYFFTPRERKYPNGSRPNRSAGTGYWKATGADKPIGKPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVSRKNSLRLDDWVLCRIYNKKGAVQKQPPLKIERFELEDKKPPIAQPNAETTEADCMHFEASDSVPRLLTTDSSCSEQVVSPELASEVQSEPKRRNSEFAYNYVDATLASEFHSANHMSPLQDIFMYLSKPMMAILGWGRMVEVKGEEDAAIIGLVRNVWLGILMQW 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00816 305 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phco2g00816 305 PANTHER NAC TRANSCRIPTION FACTOR 56 8 210 - -
Phco2g00816 305 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Phco2g00816 305 FunFam NAC transcription factor 17 162 - -
Phco2g00816 305 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Phco2g00816 305 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g00816 Phco-Chr2 9210916 9212561 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco2g00816 NAM 5.6e-39 No_clan