Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00803 ATGGATAAGCAAGTAATGCTATTCCTTCCTCATTTGCTGTTCCTCTTCACCATCTGGACACATGAAGCAGCATCTTCCACATGTCCCATGGATCTCTCTTACGTTGGTTCCATTCCCTGGAACACTAAGATCTGCAAAGACCCTATTGACAAGGATCTCTGTTGCGAAACACTAAGGAGTGTCTTTGCCATTGGCCTCGCTGAGCTCCTCAAAGATACTTCCATATTTTACCTTCCCGATGCAAACACTTCCTCCACTTGCTTACATGACTTCACACTCAGGCTTTCAGCCTTGTCCATACACCAAAACATGGTCCCTTTTTGCTTTCCTAACCCAACACGCTTCGTTTTCAACTCTTCGGCTTGTGCAGGTATCAGAACCATCCAAGATTGGACGAAGAAGGTGGGCCCAGATACCCCTTTCAACTCAACTTGCAATAGGGACCTCAAGGACAATACTCGCTGCAGACTTTGCTATGATGCTGCCTCCACACTCACTTCCAAACTCTCAACTATTGACCCAGATGCTGACCCCATAAAGTGTTTTTACTACATAGTGTTGTATGCTGCAGCTGTTGTTAACCCGTATGGTACAACCGATGTAAGCACCACGAGTTGCATACTGGGCCTGGAGCATAGTGTTGTAGTACAAGGGTCAAGTCATAGAGAAGAAGTGTGGAAGCTGGGTTTTGCGTTGTTGGGTGTTGTTATTGGTGTTGTGCTTGCTTTTGTGATGATAGTTGCGTACAGGAAGTGGGATAAGAGAAGGAGACAGAGTGTTTATCACAGGGAGATTGAGAACAAGGTCAGGGCATGTGTTTTGCCTAATGCTGGTGTAAAATGGTTTCACGTAGCGGAGCTTGAGCGTGCCACTGAGCGATTTTCCTGGACGAATGTGGTTGGTCAAGGTGGTGATGGAGTTGTGTATAAAGGTACTCTTTCTGATGGTGCTGTGGTTGCTGTTAAGCAGATTTTTTATTTGGAGGGTAAAGGAGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGCTGTTGCATTTCTAGTGATGATTTGGAAGGTAAGAGGAGGTTTTTGGTTTATGATTTTATGCCTAATGGTAGTCTCGGTGACCAGTTGTGTTCTGGTGGTGCTAACAGGCTAACATGGTCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCATCGTGACATAAAGGCTACCAACATACTTTTGGACTCCAAAATGAATGCTAAATTGGCTGATTTTGGGTTGGCCAAGCAAGGTTGTGAGGATCAGTCTCATCTCACCACAAGGGTGGCTGGCACATATGGTTATGTAGCACCAGAGTATGCTCTGTATGGACAACTAACTGAGAAAAGTGATGTCTATAGTTTCGGTATTGTTATTCTTGAAATCATGAGTGGAAGGAAAGTGCTTGATACTTTGGATTCATCTGCTGGTTCAATTACGGATTGGGCATGGACAATGACAGAATCTGGAAAGATTGAGGAAGTTTTTGATGAGTCAATAAGAGAAGGGCAAGAAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATGTGGCAGTGGCGTTAAGGCCTACTATTGTTGAGGCCCTAAAGATGTTAGAAGGTGCCATTGACATTCCCCAATTACCTGACAGACCAGTGCCACTGGGTCATGAGTCCTTCCAATCTTCTTTGTTGCATGGTTTACACAGAAGTGGTTGA 1800 0.44 MDKQVMLFLPHLLFLFTIWTHEAASSTCPMDLSYVGSIPWNTKICKDPIDKDLCCETLRSVFAIGLAELLKDTSIFYLPDANTSSTCLHDFTLRLSALSIHQNMVPFCFPNPTRFVFNSSACAGIRTIQDWTKKVGPDTPFNSTCNRDLKDNTRCRLCYDAASTLTSKLSTIDPDADPIKCFYYIVLYAAAVVNPYGTTDVSTTSCILGLEHSVVVQGSSHREEVWKLGFALLGVVIGVVLAFVMIVAYRKWDKRRRQSVYHREIENKVRACVLPNAGVKWFHVAELERATERFSWTNVVGQGGDGVVYKGTLSDGAVVAVKQIFYLEGKGDEEFCYEVEIISKIKHRNLLALRGCCISSDDLEGKRRFLVYDFMPNGSLGDQLCSGGANRLTWSQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFGLAKQGCEDQSHLTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTLDSSAGSITDWAWTMTESGKIEEVFDESIREGQEKIMERFVHVGMLCAHVAVALRPTIVEALKMLEGAIDIPQLPDRPVPLGHESFQSSLLHGLHRSG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00803 599 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 200 582 - -
Phco2g00803 599 FunFam Receptor-like serine/threonine-protein kinase At4g25390 259 374 - -
Phco2g00803 599 Gene3D Transferase(Phosphotransferase) domain 1 375 574 - -
Phco2g00803 599 Gene3D Phosphorylase Kinase; domain 1 254 374 - -
Phco2g00803 599 SMART serkin_6 294 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00803 599 Pfam Protein kinase domain 298 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00803 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Phco2g00803 599 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 375 574 - -
Phco2g00803 599 ProSiteProfiles Protein kinase domain profile. 294 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00803 599 Pfam SPARK 23 176 IPR043891 -
Phco2g00803 599 SUPERFAMILY Protein kinase-like (PK-like) 276 567 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00803 Phco-Chr2 8893201 8895000 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco2g00803 Pkinase 5.3e-42 CL0016