Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00802 ATGATCCTTATCTTCATCTTGCTCTTCACCATTCTCATAGCTACTGCTGCTTCTGCTGCATCTTCTTCATGCCCCCTGGATCTCACCTATGTTCAGACCATTCCCTGGAACACTTCAATCTGCAAAGACCCTATTAACAAAGATCCCTGCTGCCAAACACTCTCCAGCATCTTCGGCATAGGTCTTGCTGAACATCTCAAACAAACATCCATATTTTTCCTTCCTGATGTAAACACTTCCTCCACTTGCTTATCTGATTTCAAACACCACCTTGCAGCCATCTCAGTAAAACCAACCATAGTCCCTTTTTGTTTCCCTCACCCAACCCAATTTGTCACTAACTCTTCAGCTTGTGCAGGGATTAGAACTCTACAAGATTGGAACAAAAAGGTGGGCATGGATAGCCCTGTGAAAACATCATGCAAAGGGGACCTAAAGGACCAAAATCTCTGCAGAATTTGCTCAGACGCTGCTATAGAATTGGTTTCCAATCTGACACTTATTGACCCAAATGCTAATGCCGTCGAATGTTTTTACTACATAGTTTTATATGCTGCAGCTGTCGCTAATCCGTTTGGTACAACAGATCTAAGCACTACTGGATGCATATTTGGCCTGCCAGAACCATCTAATGCAGTAACAACAGGGTCATCAAACAAAAGAAGGAAAGTGATCATGCTTGTTATTACGTTGTTGGGTGTTGTTATCAGTGTTGTGCTTGCTTTTGCTCTGATGGTCGTGTACAGGAAGTGGGATAAGAGAAGGAAGGAAAATGTTCATCGCAGGGAAGTTGAAAACGAGGTTAGGGCTGGTGTTTTGCCTGGCACAGGTGCTAAATGGCTGGACATATCAGAGCTTGAACGTGCCACGAGTAAATTTTCAGAGAGTAATGTGATTGGGAAAGGTGGTGATGGGGTGGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGGTGTTAAGGAAATTTTAGATTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGTTGTTGTGTTTCAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTGATTTATGAGTTTATGCCTAATGGCAGCCTGAGTGACCGATTGTGTTGTGATGGTGCTAATAAGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCACCGAGACATAAAAGCTACCAACATACTTTTGGATTCCAAAATGAATGCTAAATTGGCAGATTTTGGGTTGGCCAAGCAGGGTAATGATGGCCAATCTCATCTCACTACAGGGGTTGCTGGCACATATGGTTATGTAGCACCAGAATATGCTTTATATGGGCAACTAAGTGAGAAAAGTGATGTGTACAGTTTCGGTATTGTGATTCTAGAAATCATGAGTGGAAGAAAAGTGCTTGATACTTTGAATTCATCCACGGATTCATTTACAGATTGGGTATGGGCACTTGCAGAATCTGGAAAGATGGAGGAAATTTTAGAGGAATCAGTAAGAGAAGGGTCAGTAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATTTGGTAGTGGCGTTAAGACCTACTATTGTTGAGGCCCTTAAGATGTTAGAAGGTGACATTGACATTCCCAAATTACCTGACAGGCCAGTGCCACTAGGTCATGCGTCCTTTCAATCTTCTCTGTTGCATGGTTTGCAGAGAAGTGGTTGA 1797 0.4213 MILIFILLFTILIATAASAASSSCPLDLTYVQTIPWNTSICKDPINKDPCCQTLSSIFGIGLAEHLKQTSIFFLPDVNTSSTCLSDFKHHLAAISVKPTIVPFCFPHPTQFVTNSSACAGIRTLQDWNKKVGMDSPVKTSCKGDLKDQNLCRICSDAAIELVSNLTLIDPNANAVECFYYIVLYAAAVANPFGTTDLSTTGCIFGLPEPSNAVTTGSSNKRRKVIMLVITLLGVVISVVLAFALMVVYRKWDKRRKENVHRREVENEVRAGVLPGTGAKWLDISELERATSKFSESNVIGKGGDGVVYKGTLSDGTVVGVKEILDLETKGDEEFCYEVEIISKIKHRNLLALRGCCVSSDNLKGKRRFLIYEFMPNGSLSDRLCCDGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFGLAKQGNDGQSHLTTGVAGTYGYVAPEYALYGQLSEKSDVYSFGIVILEIMSGRKVLDTLNSSTDSFTDWVWALAESGKMEEILEESVREGSVKIMERFVHVGMLCAHLVVALRPTIVEALKMLEGDIDIPKLPDRPVPLGHASFQSSLLHGLQRSG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00802 598 Gene3D Transferase(Phosphotransferase) domain 1 374 571 - -
Phco2g00802 598 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 374 573 - -
Phco2g00802 598 SMART serkin_6 293 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00802 598 SUPERFAMILY Protein kinase-like (PK-like) 277 566 IPR011009 -
Phco2g00802 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Phco2g00802 598 Pfam SPARK 19 173 IPR043891 -
Phco2g00802 598 FunFam Receptor-like serine/threonine-protein kinase At4g25390 258 373 - -
Phco2g00802 598 Pfam Protein kinase domain 294 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00802 598 CDD STKc_IRAK 299 567 - -
Phco2g00802 598 ProSiteProfiles Protein kinase domain profile. 293 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00802 598 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 191 581 - -
Phco2g00802 598 Gene3D Phosphorylase Kinase; domain 1 252 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00802 Phco-Chr2 8884915 8886711 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco2g00802 Pkinase 2.1e-42 CL0016