Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00801 ATGGAAAACCACGTCACCTTACTCCTTCCCCTTCTTCTGTTCCTCTTCATTACCACTCTCATACCCGCTGCTTCTCCTTCATCTTGCCCAATCAACTTCACCTACGTTCAAACCTTCCCTTGGAACACTTCAACTTGCACAAACCCAGCCAACAAACAACCCTGTTGCTCAACCCTCAACGCCATCTTCCACATAGGCCTCTCCCAACACCTCAAACAAACCTCTTTGTTTCAACTTCCCAATGAAAACACTTCCTCCATTTGCTTGTCAGATTTCCAACAAAAGCTCACAACCTTGTCAGTTCACCCATCTTTCGTCCCTTCTTGCTTCCCTAACCCCTCTCAGTTCGTTACAAACTTTTCCACCTGTGCTGGTGTTGTAACTTCTCGAGATTGGGAACAGAAGGTGGACTCAGTTAGACTTAGCCCGGTACAAACTTTCTGCAAAGACTTTGATGACCAAATTAGCTGCACCAATTGCATAGCAGCAAACTTGAAAGTGGCTCTTCAGCTTACTAGTGGTAACCCAAATGCTAGTGAGACGGATTGTTTTTCGTTCGCATCGCTGTATGCTGCAGCTTTTGTTAATCCAGAAGGCACAACTGATGTCACCACGATTGGTTGCATATTGGGCGTGCCACTTTCTACGGAAGTGGCAAAAGGGTCATCGAATAAGAGAGGAAAAGTTATGAAGGTGGTTTTTACGTTATTGGGTGCTGTTGTTGGGGTTATTATTATTTTTGTGCTGATGGTGGTTATGTACAGGAAGTGGGACAAGAGAAGGAAGGAAAATGTTTATCACATGGAAATTGAAAACGGTGTCAGGAACAGTATTTTGACGAACACTGGTGCAAAATGGTTTCACATATCGGAGCTTGAACGTGCCACTAACAGATTTTCAAGGAGAAATATGGTTGGTCAAGGTAGTGATGGGGTTGTGTACAAAGGGAAGCTCGGGGATGGCACTTTGATTGCTGTGAAGGAGAATTTGAATGTGGAAAGTAAAGGGGATGAAGAGTTCTGCTATGAGGTGGATATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGAGGTTGTTGCATTTCTAGTGATAGTTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGCCTAATGGCAACCTCAGTTACCAACTATCACATGGTGGATTAACATGGCCACAAAGGAAGAACGTAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAGATCAAACCTCCAATTTATCATCGTGACATAAAGGCTACAAACATACTTTTGGACTCCAAAATGAATGCTAAATTAGCAGATTTTGGGCTTGCCATGGAAGGTAGTGAGGACCAGTCTCCTCTCACCACAAGGGTGGCTGGAACATATGGTTATGTGGCACCCGAGTATGCTTTATATGGGAAACTCACTGAGAAGAGTGATGTGTACAGTTTTGGTATTGTGGTTCTGGAAATCATGAGTGGAAGAAAAGTGCTTGATACATTGAAATCATCTGCGGATGCAATCACTGATTGGGTGTGGACACTAGCAGAATCGGGAAAGATGATGGAAATATTTGATGAGTCAATAAGAGAAGGGCCAGTGAAAATCATGGAAAGGTTTGTACATGTTGGAATGCTTTGTGCTCATGCAATGGCGGCTTTAAGGCCTACTATTGCTGAGGCCCTTAAGATGTTAGAGGGTGACACTGACGTTCCCACACTACCAGATAGGCCTGTGCCTTTGGGTCATGCGTCCTTTCAATCTTCTCTGTTGCATGGTTTGCAACAAAGTGGAAGATCTATGCAACATGTTTCATCCTATTCATGA 1836 0.4341 MENHVTLLLPLLLFLFITTLIPAASPSSCPINFTYVQTFPWNTSTCTNPANKQPCCSTLNAIFHIGLSQHLKQTSLFQLPNENTSSICLSDFQQKLTTLSVHPSFVPSCFPNPSQFVTNFSTCAGVVTSRDWEQKVDSVRLSPVQTFCKDFDDQISCTNCIAANLKVALQLTSGNPNASETDCFSFASLYAAAFVNPEGTTDVTTIGCILGVPLSTEVAKGSSNKRGKVMKVVFTLLGAVVGVIIIFVLMVVMYRKWDKRRKENVYHMEIENGVRNSILTNTGAKWFHISELERATNRFSRRNMVGQGSDGVVYKGKLGDGTLIAVKENLNVESKGDEEFCYEVDIISKIKHRNLLALRGCCISSDSLKGKRRFLVYDFMPNGNLSYQLSHGGLTWPQRKNVILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFGLAMEGSEDQSPLTTRVAGTYGYVAPEYALYGKLTEKSDVYSFGIVVLEIMSGRKVLDTLKSSADAITDWVWTLAESGKMMEIFDESIREGPVKIMERFVHVGMLCAHAMAALRPTIAEALKMLEGDTDVPTLPDRPVPLGHASFQSSLLHGLQQSGRSMQHVSSYS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00801 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Phco2g00801 611 Gene3D Phosphorylase Kinase; domain 1 260 379 - -
Phco2g00801 611 SMART serkin_6 299 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00801 611 FunFam Receptor-like serine/threonine-protein kinase At4g25390 264 379 - -
Phco2g00801 611 Gene3D Transferase(Phosphotransferase) domain 1 380 575 - -
Phco2g00801 611 ProSiteProfiles Protein kinase domain profile. 299 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00801 611 Pfam Protein kinase domain 301 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00801 611 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 588 - -
Phco2g00801 611 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 380 576 - -
Phco2g00801 611 SUPERFAMILY Protein kinase-like (PK-like) 278 569 IPR011009 -
Phco2g00801 611 CDD STKc_IRAK 305 570 - -
Phco2g00801 611 Pfam SPARK 24 184 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00801 Phco-Chr2 8876278 8878113 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco2g00801 Pkinase 4.5e-41 CL0016