Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00800 ATGCATTCTATTCTAAACGTGCTTTTGGACCACCGCAAGCCAGGGTTGACTAGTAAAACTTGCTATTATAAAAGTCCAATGGTCACAAAATCAAATGTTTCAAGTTTGTGTCTCCACCTGAAAATGGATAAGCAAGTGGTGCTCCTTTCTCTCCTAATGTTCATCTTCACTGTTTCTATAGCTGGTGCTGCATCTACCACATGCCCCATGGATCTCAGCTATGTTGAGACCTTTCCATGGGATACTTCATCCTGCAGAGACCCTGTTGATAAGGAGCACTGTTGCCAAGCTTTGCTCAGTGTAATTGGCCTGGGGATGTCCCAACACCTCAAAGACACTTCCTTCTTTCAGCTTCCTGATGAAAACACTTCCTCCCTTTGCTTATCCAATTTCCAGACCAAACTCTCAGCCTTGTCAATTAACTCCTCTTTGGTTCCTCATTGTTTTCCTCGAGCTTCCGAGTTTGTTACTAACACTTCAACTTGTGCAGGAATCATAAATACCGATGATTGGAAGCAAAAAGTGGGCATGATTAGCCCTTTAGACACTTCTTGTAATGGGGACCTGAGTGATCAAACTCGTTGCAGCATTTGTACTGATGCTGGTCTCAAAGTGACTTCCCAACTCAATAGTTTGGACCCAAATGCCACAAAGTGCTTTTACTTCACAGTTTTGTATGCCTCAGCTATAGTTAACCAGTTTGGTCCAACACATTTGGGCACAGCTGGTTGCGTACTAGGCATGCCGCTGTCTGTAAAAGGTTCATCGAATAAAAAAGAAGTGCTGAAACTTGTTTTTGGGTTGGTGGGTGCTGTTACTGGTCTTGTGCTGGGGTTTGTGTTGATTATGATATACAGGAAGTGGGATAAGAGAAGGAAGGAAGATAGGTATCACAGGTCGGTTGAAAACGGTGTGAGGAACAGTGTTTTGCCTAATACTGGTGCCAAATGGTTTCACATATCGGAGCTTGAGCGAGCCACTAATAAATTTTCTCAGAGGAATATGCTTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGCGGTGAAGGAAATTTTTGATTTGGAGACGAAAGGGGATGAAGATTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTGCTTGCTCTTCGGGGTTGTTGCATTTCTAGTGATAGTTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGCCTAATGGAAGCCTGAGTTACCAATTGTCAGTTGCTGGGGCTAATAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAGATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGATTCCAAAATGAAAGCCAAAGTGTCAGATTTCGGGTTGGCCAAGCAAGGGAATGATGGCCAGTCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTTTATGGGCAACTAACAGAGAAGAGTGATGTGTACAGTTTTGGCATTGTGATTCTTGAGATGATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCAGTTGTCTTAATCACGGATTGGGCATGGACACTGGCAAAATCAGGGAACACACAGGACATTTTTGAGCAGTCAATAAGAGAAGAGGGACCAGAGAAGATCATGGAAAGGTTTGTTCTTGTGGGAATACTGTGTGCTCATGCAATGGTGGCTTTAAGGCCTACTATTGCTGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATACCCCAGTTACCTGACAGACCAGTGCCACTGGGTCACGAGACCTTCCAATCTTCTTTGTTGCATTTGCAAAGTAGTGGAAGATCATCTGCATACTTTTCATCATATCTTGCATCTCATTCAACAAGTACTAGAACAGCATAG 1968 0.4329 MHSILNVLLDHRKPGLTSKTCYYKSPMVTKSNVSSLCLHLKMDKQVVLLSLLMFIFTVSIAGAASTTCPMDLSYVETFPWDTSSCRDPVDKEHCCQALLSVIGLGMSQHLKDTSFFQLPDENTSSLCLSNFQTKLSALSINSSLVPHCFPRASEFVTNTSTCAGIINTDDWKQKVGMISPLDTSCNGDLSDQTRCSICTDAGLKVTSQLNSLDPNATKCFYFTVLYASAIVNQFGPTHLGTAGCVLGMPLSVKGSSNKKEVLKLVFGLVGAVTGLVLGFVLIMIYRKWDKRRKEDRYHRSVENGVRNSVLPNTGAKWFHISELERATNKFSQRNMLGQGGDGVVYKGTLSDGTVVAVKEIFDLETKGDEDFCYEVEIISKIKHRNLLALRGCCISSDSLKGKRRFLVYDFMPNGSLSYQLSVAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVSDFGLAKQGNDGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEMMSGRKVLDTMNSSVVLITDWAWTLAKSGNTQDIFEQSIREEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPQLPDRPVPLGHETFQSSLLHLQSSGRSSAYFSSYLASHSTSTRTA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00800 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Phco2g00800 655 ProSiteProfiles Protein kinase domain profile. 330 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00800 655 Gene3D Transferase(Phosphotransferase) domain 1 411 609 - -
Phco2g00800 655 SMART serkin_6 330 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00800 655 FunFam Receptor-like serine/threonine-protein kinase At4g25390 295 410 - -
Phco2g00800 655 PANTHER OS01G0750732 PROTEIN 84 621 - -
Phco2g00800 655 Pfam SPARK 64 219 IPR043891 -
Phco2g00800 655 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 411 611 - -
Phco2g00800 655 CDD STKc_IRAK 336 605 - -
Phco2g00800 655 Gene3D Phosphorylase Kinase; domain 1 291 410 - -
Phco2g00800 655 Pfam Protein kinase domain 332 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g00800 655 SUPERFAMILY Protein kinase-like (PK-like) 315 622 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00800 Phco-Chr2 8870031 8871998 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phco2g00800 Pkinase 5.6e-43 CL0016