Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00791 ATGGCCACAGGTTTCAATGAAAAATTGGGTGAAGGAAGTTATGGTTCTGTGTTCAAGGGAAAGTTGTGTAGTGGACCTTGTGTCGCTATAAAAGTGTTACGAAAATCAAAAGATAAGTCTGATGTTTATAGTTTTGGAATGCTTATGATGGAGATAGCAAGCAAGAGGAAAAACTTAAACCCCCATGTAGAGCGTTCAAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAAATTGACAAAGAGAAAGATATAGAAATGGAAGATGTCATAGAGGATGAGAAGAAAATTGCAAAAAAGATGATCATAGTTTCACTTTGGTGTATACAATTAAAACCAAATGATCGTCCATCCATTAATAAGGTAGTCGAAATGCTTGAAGGAGACATTGAGAACCTTAAAATACCTCCAAAGCCTTCTCTGTATCCACATGAAACATTGGAAAGAATTTGCTCTGACCAAACAACATTGCCTGAGTTCATTAGTTCTTCAAGCAATTCCATGGAGATTGTCACTAATGCTCCACTAGATGAAAGTATTTGA 543 0.361 MATGFNEKLGEGSYGSVFKGKLCSGPCVAIKVLRKSKDKSDVYSFGMLMMEIASKRKNLNPHVERSSQLYFPFWIYDQIDKEKDIEMEDVIEDEKKIAKKMIIVSLWCIQLKPNDRPSINKVVEMLEGDIENLKIPPKPSLYPHETLERICSDQTTLPEFISSSSNSMEIVTNAPLDESI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00791 180 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 36 IPR045874 GO:0004672
Phco2g00791 180 Gene3D Transferase(Phosphotransferase) domain 1 11 141 - -
Phco2g00791 180 SUPERFAMILY Protein kinase-like (PK-like) 38 127 IPR011009 -
Phco2g00791 180 SUPERFAMILY Protein kinase-like (PK-like) 6 36 IPR011009 -
Phco2g00791 180 Pfam Protein tyrosine and serine/threonine kinase 37 126 IPR001245 GO:0004672|GO:0006468
Phco2g00791 180 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00791 Phco-Chr2 8742265 8743248 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00791 PK_Tyr_Ser-Thr 4e-07 CL0016