Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00789 ATGGCAAGTGTGTTCCTCTTCCAACGTGATTCTGCGTTGATGGCGTTATTGCTGTTGCCACTGCTAATGCTTCTTCTTATCAGAACTGGCAGCACCGCTCATAACGACTGCGATGAGGAATTCTATTGTGGACCGAACCAACCCCTCATTAGATTTCCCTTCAAACTCATCACGGAGATGGACCAGCCATGCAGTTATCCCCTTCTTTGTTTTTCTTGCACTGAAAAAAAAGAGACCATGCTTGCGCTTCCTACTATGAAACTCCTAGTCAGTGACATAGACTACCGAATTCAGGAAATTCGCTTCACTGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACCATCAATTTTATTCGAAGTTATCAATTTGAATCACCATATGATGGACCACACAATAACTTGAGCTTCTTCAATTGCACTTCAGCTGAGCATCCACACCTCAGAAACTACTACGACGATGGCTCACATTCAACACAAGACATGGTCTCCTGTCCGATTTACATTTCTAATTCCGTTGAAAGTGTCCTCAAATTGGATCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCAATCGCAGCCATCCACAGGAATGTCTTGATTTTGAGATGGTCCAAACCAAATTGTGCTGAGTGCAAAAGAAAAGGCAAGAGATGTACATGGAAGACCAACAACACCACAGGAGACATCGATTGTTTTGAATGCAAACCGAAGAGAATTCATGTTCCTAAATCTTTTATTTTTGCTTCTACAGGTTCGATCCTTTTGGGGCTGCTGGTCGTTGCTGTCTTCAAGAGCATCCTCTATTTTAGGAAAAAGCAAGAAGACCAAGAAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCAGCAAGATTCACCTACGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAAGCTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAACTTTCGAGTGAGATTCCGGTGGCTGTGAAGATCCTCAACAGTACAGAGGGAGAGGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTCCGTTTGCTTGGCTTCTGTGCAGATGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTTGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCAGCCCATTATTCACTTTGACATAAATCCTCACAACGTGTTACTTGATCACAACTTCACTCCAAAAATATCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCCGATATTTACAGTTATGGAATGCTGTTGTTAGAAATGGTTGGTGGGAGAAAAAATGTGGACATGTCTTCTCCACAAAATTTCCATGTTCTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTGAAGAGGAAAATCAGTTTGTTGTGCCTCCTAATCCATTTCACTCAACAACTTCCACTACAGTTAAGGGACTCAGTTCTACTAGACGACCTTTGCAGTTGGAAGTGATTCAAGAATGA 1854 0.4283 MASVFLFQRDSALMALLLLPLLMLLLIRTGSTAHNDCDEEFYCGPNQPLIRFPFKLITEMDQPCSYPLLCFSCTEKKETMLALPTMKLLVSDIDYRIQEIRFTDPENCFSNKFNQTINFIRSYQFESPYDGPHNNLSFFNCTSAEHPHLRNYYDDGSHSTQDMVSCPIYISNSVESVLKLDLTSCTKMFDLTAPIAAIHRNVLILRWSKPNCAECKRKGKRCTWKTNNTTGDIDCFECKPKRIHVPKSFIFASTGSILLGLLVVAVFKSILYFRKKQEDQERVDKFLEDYRAEKPARFTYADLKRITNGFKEKLGEGAHGAVFRGKLSSEIPVAVKILNSTEGEGNEFINEVGIMGKIHHINVVRLLGFCADGLHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHVALGIAKGIEYLHQGCNQPIIHFDINPHNVLLDHNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPQNFHVLYPDWIHNLVDGDVHIHVEDEGDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLETEEENQFVVPPNPFHSTTSTTVKGLSSTRRPLQLEVIQE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00789 617 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Phco2g00789 617 FunFam serine/threonine-protein kinase PBS1-like 274 382 - -
Phco2g00789 617 Pfam Wall-associated receptor kinase galacturonan-binding 37 104 IPR025287 GO:0030247
Phco2g00789 617 FunFam PR5-like receptor kinase 383 588 - -
Phco2g00789 617 Pfam Protein tyrosine and serine/threonine kinase 310 577 IPR001245 GO:0004672|GO:0006468
Phco2g00789 617 Gene3D Phosphorylase Kinase; domain 1 280 382 - -
Phco2g00789 617 PANTHER RUST RESISTANCE KINASE LR10-RELATED 280 595 IPR045874 GO:0004672
Phco2g00789 617 SUPERFAMILY Protein kinase-like (PK-like) 290 578 IPR011009 -
Phco2g00789 617 Gene3D Transferase(Phosphotransferase) domain 1 383 588 - -
Phco2g00789 617 ProSiteProfiles Protein kinase domain profile. 308 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00789 Phco-Chr2 8712309 8714349 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco2g00789 PK_Tyr_Ser-Thr 1.5e-43 CL0016